Tetrapisispora phaffii: TPHA_0D00940
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Entry
TPHA_0D00940 CDS
T02235
Symbol
TPHA0D00940
Name
(RefSeq) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0D00940 (TPHA0D00940)
Enzymes [BR:
tpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TPHA_0D00940 (TPHA0D00940)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
90S particles
Helicases
TPHA_0D00940 (TPHA0D00940)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
11534616
NCBI-ProteinID:
XP_003685169
UniProt:
G8BSB4
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All DBs
Position
4:complement(186966..188678)
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AA seq
570 aa
AA seq
DB search
MDIFRVLTRGANVNKKATKKNGVSVDYSMVKNEQTMDKSREEHTINRELDFFRNKRIINK
VEKEKLENSKDADEDEKKVVTETELNFDETLKITTKEEALALRKSYKGNITGSDVPLPIG
SFEDLISRFSFDKRLLRNLLENHFTEPTPVQSECIPLALHTRDMLACAPTGSGKTLAFLI
PLLQQVIEQKEEIGLKGLIISPTKELADQIFLECTKLANRLYLDKKRPLQIALLSKSLSS
KLKNKVISDKKYDIIISTPLRLIDVVKNEALDLSTVKHLIFDEADKLFDKTFVEQTDDIL
NSCSDPSLRKAMFSATIPSNVEEIAQTIMMDPIRVIIGHKEAANANIEQKLIFCGNEEGK
LIAIKQLVQQGEFRPPVIIFLESITRAKALYHELMYDNLNVDVIHAERTPIQRNKIIEKF
KTGELWCLITTDVLARGIDFKGVNLVINYDVPRTAQAYVHRIGRTGRGNRSGKAVTFYTK
EDSIAVKPIVNVMKQSGAEVSAWMEKIAKISKKEKQLIKNGQAHKERKQISTVPKIEKQK
KKRKFEMIEASKKRKLMENSETSKIEPTEE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggatatttttagagttttaacaagaggtgcaaatgttaataagaaagcaactaagaaa
aatggtgtttctgttgattacagtatggtgaagaatgagcaaactatggataaaagtaga
gaagagcatacgatcaatagagagcttgattttttccgtaataagagaatcattaataaa
gtcgagaaggaaaagctggaaaactctaaggatgcagatgaagatgagaagaaggttgta
actgagactgaattgaactttgatgaaactttgaaaatcacaaccaaagaggaagcgctt
gctttacgtaagtcgtataaaggtaatattacaggttcagacgtaccacttccaattggt
tcctttgaagatttaatctctcgtttttcatttgataaacgtttattaagaaatctatta
gagaatcattttactgaaccaactcctgttcaatcagaatgtattccattggctttacat
actcgtgatatgttagcctgtgctccaactggttctggtaaaacactggcatttttaatc
cccttgctacaacaagtaatagaacagaaagaagaaattggtttgaaaggtttgataata
tcaccaactaaagaactggcggatcaaatatttttagagtgtaccaagttggcaaacagg
ttatatttggataaaaaaagaccattacaaattgcattattatccaaatcactaagttct
aaacttaagaataaagttataagtgataaaaaatatgatataataatatcgactccattg
agactaatcgatgtggttaaaaatgaagcgttagatttatcaactgttaagcatcttatt
tttgatgaagctgataaactatttgataaaacttttgttgaacaaactgatgacatttta
aattcttgtagtgatccaagtttacgtaaagccatgttttctgctacaattccatcaaat
gtcgaagaaattgctcaaactattatgatggatcctattagagttattattggtcataag
gaagctgctaatgctaacattgaacaaaaattaatattttgcggtaacgaagaaggtaaa
ctaatagccatcaaacaattagtccaacagggtgaatttagacctccggtcattatcttt
ttagaatctattacgagagcaaaagctttatatcacgaactgatgtatgataacttgaat
gtcgatgttattcacgctgaaagaacaccgatccagagaaataaaatcattgaaaaattt
aagactggtgagttatggtgtctaattaccacggacgttttagcccgtggtattgatttc
aaaggtgtcaatctagttatcaactacgatgttccaagaactgcacaagcttacgttcat
agaattggtagaactggtagaggtaatcgttcaggtaaagcagttactttttacacaaag
gaagattccattgcagtcaaaccaatagttaacgttatgaagcaaagtggggcggaagtt
tcagcctggatggagaagattgctaagatctctaaaaaggaaaaacaattaatcaagaat
ggtcaagcacataaagaacgaaaacaaattagtactgttccaaagatagagaaacaaaag
aaaaagcgtaagtttgaaatgattgaagcctctaaaaaaagaaaacttatggagaactca
gaaacttccaagattgaacctactgaggagtga
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