Tetrapisispora phaffii: TPHA_0E02960
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Entry
TPHA_0E02960 CDS
T02235
Symbol
TPHA0E02960
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03022
Basal transcription factors
tpf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TPHA_0E02960 (TPHA0E02960)
09124 Replication and repair
03420 Nucleotide excision repair
TPHA_0E02960 (TPHA0E02960)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpf03021
]
TPHA_0E02960 (TPHA0E02960)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0E02960 (TPHA0E02960)
Transcription machinery [BR:
tpf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TPHA_0E02960 (TPHA0E02960)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TPHA_0E02960 (TPHA0E02960)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
11531410
NCBI-ProteinID:
XP_003685820
UniProt:
G8BU08
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All DBs
Position
5:622226..623698
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AA seq
490 aa
AA seq
DB search
MAPTIRVESDEDEETVMVSSTNNRKQKKLVHFSNEEENEVTSKEAKKIKAEPIENPNNVT
VQSSSRTDSASKSNHFKSNDKDKERKSKKKKITNDQLAGTSGGYSWEDELKRSWDLVTVD
DENDMASLVASIVEARKKRSAQKVVTPYQRGIIRSLILILDCSEVMSEKDLRPNRNAMSI
QYAIDFIQEFFDENPISQLGIVIMRNGLANLLSPIGGNPQAHIDALKSIRREEPKGNPSL
QNALEMARGLLLPVPSHCTREVLIVFGGLSSTDPGDIHQTIQSLVNEKIRVKVIGLSAQV
AICKELCKATNYDDESFYRVILDEVHFKELYDEAVTPLPVNKINKAFTLVKMGFPTRVFE
ENPTFCACHSKLVYGGYFCPNCNSKVCSLPTVCPCCDLMLILSTHLARSYHHLMPLKTFS
EVPTSETFETENCFSCQMTFPSLRNKKTGELLTSSRYRCQDCENDFCIDCDLFIHEILHN
CPGCESSPTI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaacgataagagtagaatcagatgaagatgaagaaactgttatggtttcttct
acaaataatagaaaacaaaaaaaactggttcattttagcaacgaagaggaaaatgaggta
acttcaaaggaagctaagaaaataaaggcggaacctattgagaaccccaacaatgttaca
gttcaaagttcatctagaactgattcggcttctaaaagtaatcatttcaagagcaatgat
aaagataaggaaaggaaatctaagaagaagaagatcaccaatgaccaactggcaggtact
agtggtggttattcatgggaagatgagttaaaaagaagttgggatttagttacagtagat
gatgagaatgatatggcttcgctagtcgcaagtatagtagaggcccgtaaaaaacgttct
gcgcaaaaggtggtcaccccttatcaaagaggtattatcagatctttaatattgatatta
gattgtagcgaagttatgtctgaaaaagatttgagaccgaatcgtaatgctatgagcatc
caatatgcgatcgattttatacaagaattttttgatgaaaatcctatttcacaactaggt
attgtcattatgagaaatggtttggcaaatttattaagtccaataggtgggaacccccaa
gcacatattgatgctttgaaatcaattcgtagagaagagccaaaaggtaatccttcactt
cagaatgctttggaaatggcaagggggttactactaccagttccatctcactgtacaaga
gaagttttgattgtttttggaggtttgtcgagtacagatccaggtgatatacaccaaact
atccaatctttagtaaatgaaaagattcgtgtaaaagtaatagggctatctgctcaagtt
gctatttgtaaggagctttgtaaagccacaaactacgatgatgaatcattttacagagta
atattggacgaagttcatttcaaagaattgtatgatgaagcagttactcctcttcctgta
aataaaattaataaagcatttacgttggttaaaatggggtttccaactagagtatttgaa
gagaatccaaccttttgtgcatgccattctaaactagtttatggaggctacttttgccct
aactgtaacagcaaagtgtgctcattgccaacagtatgcccctgttgtgatttaatgcta
atcttatctactcatttagctcgttcttaccatcatctaatgcctttaaagacttttagt
gaagttcctacaagtgaaacttttgaaacagaaaattgttttagttgtcaaatgacattt
ccatctttaaggaataagaagactggtgaattgcttacaagttcacgctatcgatgtcag
gattgtgaaaatgatttctgcatcgattgcgatctctttattcatgaaatacttcataat
tgtcctgggtgtgaatccagtcctacaatttaa
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