Tetrapisispora phaffii: TPHA_0N01130
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Entry
TPHA_0N01130 CDS
T02235
Symbol
TPHA0N01130
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TPHA_0N01130 (TPHA0N01130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpf03041
]
TPHA_0N01130 (TPHA0N01130)
Enzymes [BR:
tpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TPHA_0N01130 (TPHA0N01130)
Spliceosome [BR:
tpf03041
]
Complex A
U2 snRNP components
U2 related factors
TPHA_0N01130 (TPHA0N01130)
Complex B
TPHA_0N01130 (TPHA0N01130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pom
Motif
Other DBs
NCBI-GeneID:
11532140
NCBI-ProteinID:
XP_003688328
UniProt:
G8C166
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Position
14:complement(237020..239653)
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AA seq
877 aa
AA seq
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MRYCLLEYIIMTDTPYVHETNTEKERLFEERRAKLAKWRKKKDDDHGGYDKPVKEASENA
TSMNKDINLTETEAKLLERQLKLQEWKKKKRERDQLRLKESEQSVGETKLKKAKKPKRRK
IQFDDSDEEDSDKQLPLYMPGSSEVTKTNEISKNINKSSNDTEDVDPLESFMNSINTSKN
SNGTLTGSLIDDNDTLDNVLVENGSDDDNEALLRYKKVAKLKASKIVQHMNFKKEDLVPF
PKSFYVEPEAVHEMSNEAVDELRLNLGNIKISGKNCPRPITRWSQLGISSDVMYLLTKTL
QYDTPTPIQSQAIPAIMTGRDVIGISKTGSGKTISYALPLIRHVKAQRPLSNSETGPLGL
IIAPTRELAIQINEEIQKFIKSDPSIRSICCTGGSELKNQIYEFKRGIEIVVATPGRFID
LLTLNTGKLLNTKRITSVILDEADRLFDMGFEPQVTQIMKTIRPDKQCVLFSATFPIKLQ
AFVKRVLHNPLTITIDSKTMVNENVHQAFEILNNDSEKFFKLIEILDNFVEKRESSQSKG
SEQVEDEIIDKKIIIFVSSQQTCDAVAANLEKYDYDVFSIHAGRSYQERVSNLEKFKKTK
NSILLCTEVLSRGLNVPEVSLVIIYNAVNKFSQYVHTTGRTARGTRRGNAITLLLSDELD
AAYILKKAMRDEELAENSPEKISILDEMVNKFEVGLKSGKFTISKGLGGKGLDNLDAQRN
KNNNKEKEDFKRISKGTVNNDIDGGTVDMDDVSNDVVADIEVPKLKYEIIRNDNADKAST
FSAHVYINDLPKLIRWEVSKNTTLSNVKRETGCSITSRGQYYPDNKNPKSDKDPPKLFLL
IEGKEEKDIIFSIDLLEGRVKEGLRKVEIQTLKSTKY
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgcgttattgtcttctggaatacataataatgactgacaccccgtatgtacatgaaact
aatactgagaaggagaggcttttcgaagaacgaagagccaaactagctaaatggaggaag
aagaaggatgatgatcacggtggctatgacaagccagttaaagaggcatctgagaacgca
acttcaatgaacaaagatattaacctaactgagacagaggcaaaacttttagagaggcaa
ctgaaactacaagaatggaagaagaagaaacgggaaagagatcagttgagattaaaagaa
tcagaacaatctgttggggagacgaaattaaagaaagctaaaaagcctaaaagaaggaag
atccaatttgacgatagtgatgaagaggatagtgataagcagcttcctctttatatgcca
ggatcctctgaagtaacaaaaactaatgaaatttcaaaaaatataaataagtcttctaat
gacacggaggatgtcgatccattggaaagttttatgaattctattaatacttcaaagaat
tctaacggtacattaaccggatcgttaattgatgataatgatactctggataacgtacta
gttgagaacggcagtgatgatgataatgaagccttattacgatacaagaaggtagctaaa
ttaaaagctagtaaaatagttcagcatatgaactttaaaaaggaagatcttgtacctttt
ccaaaatcattttatgtagaaccagaagcagtgcatgagatgtcgaatgaagctgttgac
gaattaagattaaatttgggcaatatcaaaatttctgggaaaaattgcccaagaccaata
actagatggtctcaactcggtatttcatcagatgttatgtatttattaacaaaaactttg
caatatgatactccaactccaattcaatcacaagctataccagccataatgacaggtaga
gatgtaattggtatttcaaagaccggatctggtaaaacaatatcgtatgctttaccttta
atacgacatgtcaaagctcaaagacctctatcaaactcagaaactggcccattaggatta
ataatagccccaacacgagaactggcaattcaaattaatgaagaaatccagaagttcata
aagagtgatccttcaataagatcaatatgttgtacaggaggttctgaactaaaaaatcaa
atctatgaatttaagagaggcatcgagatagtcgtagctacgccaggtagatttattgat
cttttgactttgaatactggtaagttgttaaatactaaaagaatcacttctgtgatatta
gatgaggcagatagattatttgatatggggtttgaacctcaagttactcagataatgaaa
actattagacctgataagcagtgtgtattgtttagtgccacattccctattaaattacaa
gctttcgttaagcgtgtgctgcataatccattaactattaccatcgactcaaaaacaatg
gtaaatgaaaatgtccaccaagcatttgaaatactaaataatgatagtgaaaaattcttc
aagctaattgagattcttgataatttcgtcgagaaaagagaatcatctcaaagtaaagga
tcagagcaagtagaagatgaaattatcgataaaaaaattatcatatttgtatcaagtcaa
caaacttgtgatgccgttgcagctaacttagaaaagtatgactatgatgttttttcaata
catgcaggaaggtcatatcaagaaagagtatcaaacttagagaagtttaagaaaacaaag
aatagcattctattatgtactgaagttctttcaagaggtttaaacgttcctgaagtttca
ttagttataatatataatgcagtcaacaaattttctcaatatgttcataccactggaagg
actgctcgtggtacaagaagaggtaatgcaattactttattgttgtctgatgaacttgat
gctgcatatatattgaaaaaggccatgagagatgaggaactggcagaaaatagcccagaa
aagatttcgatattagatgaaatggtaaacaagtttgaagttggattgaaaagtggtaag
ttcactatttcaaagggtcttggtggtaaaggattggataatttagacgcacaaaggaat
aaaaataacaacaaagagaaagaagattttaaacgtatttctaagggaacagtgaataac
gatattgacggtgggactgtggatatggatgacgtcagtaatgatgtcgttgctgatatt
gaagttccaaaattaaaatatgaaatcattagaaatgataatgccgataaagcttcaaca
ttcagtgcacatgtctatatcaatgacctccccaaattaattagatgggaagtctcaaaa
aacactaccttatctaatgtaaaacgtgagacaggttgcagcataacgagtagaggacaa
tattatcctgataataaaaaccctaagtcagataaagacccacctaaattatttttactt
attgagggaaaagaagagaaggatattatttttagtattgatttattagaaggaagagtc
aaagagggtttacgtaaagttgaaatacaaaccttgaagagtactaaatattaa
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