Treponema phagedenis: FUT81_03605
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Entry
FUT81_03605 CDS
T06342
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tphg
Treponema phagedenis
Pathway
tphg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FUT81_03605 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tphg03400
]
FUT81_03605 (uvrB)
DNA repair and recombination proteins [BR:
tphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FUT81_03605 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FUT81_03605 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
HPF1
UB2H
AAA_22
Microtub_bd
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QEK08615
LinkDB
All DBs
Position
complement(797440..799428)
Genome browser
AA seq
662 aa
AA seq
DB search
MKQFELISDYAPSGDQPEAIRQLADGVLAGDRFQTLKGVTGSGKTFTMANIIQAVQKPTL
IISHNKTLAAQLYREFKGFFPHNAVEYFVSYYDYYQPEAYVPARDLYIEKDASINDEIDR
LRLSATFSLMERRDVIVVSTVSCIYGLGLPESWRDLRITIEKGQTVDMENLKRQLVSLQY
ERNDAVLERGRFRLKGDVLEVFPAYMEEAYRIEFDWEEIVRIRRFHPISGEISTEFEELS
IYPAKHFVLKEDAIPTALVRIRKELDDRLAVLRAQNKLLEAERLKTRTEYDIEMLSEMGY
CPGIENYSAPIANRKPGEPPATLFHYFPKDFLLFMDESHVTFPQVGAMYEGDRSRKQNLV
DFGFRLPCALDNRPLKINEFESMLNQAIFVSATPGPKEIQYSTRIVEQLIRPTGLLDPIL
EVHKSEGQMEDIYREIQKRIVVGERSLILTLTKKMAEDLTDYLLGLGLKVKYIHSEIETI
ERVEILKGLRAGEFDVLIGINLLREGIDLPEVSFIGILDADKIGFLRSTTSLIQIVGRAA
RNENGKVIMYADRISDAMRETITETERRRSIQQAYNAAHGITPKTIKKAIEDILVRENEL
KKEAAQAETEPLINSFNLLVPADRKKLIKKLEQQMSAFADELRFEEAAAVRDKIEEIKRL
ST
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtttgagcttatttcggattatgcgccttcgggggatcagccggaggctatt
cggcagttggcggacggtgtgcttgcgggggatcgatttcagacgttgaagggcgtaacc
ggctcggggaagacgtttacgatggcgaatattattcaagcggtgcaaaagccgacgctg
attatcagtcacaacaagacgctggcagcgcagttgtaccgcgagtttaagggctttttt
ccgcataatgcggttgagtattttgtttcgtattacgattattatcagccggaagcgtat
gtgcccgcccgcgacctctatattgaaaaggatgcttcgatcaatgatgagattgaccgt
ctgcgtttgtccgctacgttcagtttaatggaacgcagggatgtgattgttgtttcaacc
gtgtcctgtatttacggtttgggtttgcctgaatcgtggcgcgatttgcgcattacgatt
gagaaggggcaaacggtcgatatggagaatttaaagcggcaattagtttcgttgcagtac
gagcggaatgatgcggttttggagcgcggccggttcaggctgaaaggcgatgtgcttgag
gtttttcccgcttatatggaagaagcttaccgaatagaatttgactgggaagagattgtg
cgtatccgccgttttcatccgataagcggagaaatcagtacagagtttgaagagctttcg
atttatcctgcaaagcattttgttttaaaggaggatgcaattccgactgcgctggttcgt
atccggaaggagcttgacgatcggcttgccgtgctgcgggcgcaaaataaacttttggaa
gcggagcggcttaaaaccagaaccgagtacgatattgaaatgctttcggagatgggctat
tgccccggaatagaaaattattccgcaccgattgcaaacagaaaaccgggtgagccgcct
gccacactctttcattatttcccgaaggattttcttctttttatggatgaaagccacgta
acttttccacaagtgggcgcaatgtacgaaggcgaccgttcacgaaaacaaaatctggta
gatttcggcttccgtcttccttgtgcgcttgacaatcgcccgcttaaaataaatgagttt
gaaagtatgcttaatcaggcgatctttgtttcggcaacaccgggtccaaaagaaatacaa
tactcaacgcgcattgtcgaacagcttatccgcccgaccggattacttgacccgatattg
gaagtgcataagtcggaagggcaaatggaagatatctaccgcgaaatacaaaaacgcatt
gtcgtcggagagcgcagccttattttaacacttaccaaaaaaatggcggaagaccttacc
gactatcttttagggctcgggctcaaagtaaaatatattcactccgagatagaaaccatt
gagcgtgttgaaatcctcaaaggtttgcgcgcgggcgaatttgatgtgcttatcgggatt
aaccttttgcgggaaggaattgacctgcccgaagtttcttttatcggaatcctcgatgcg
gataaaatcggctttttgcgctccacaaccagcttaatccagattgtcgggcgcgccgcc
agaaacgaaaacggcaaggttatcatgtacgcagaccgcatcagcgatgccatgcgcgaa
accatcacggaaacggaacgccgccgcagcattcaacaggcatacaacgctgcgcacggc
attacgccgaaaaccattaaaaaagcaattgaagacatccttgttcgcgaaaacgagctt
aaaaaagaagctgcccaagcagaaaccgaaccgctgatcaacagctttaatctgcttgtc
cccgccgaccggaaaaagcttatcaaaaaacttgaacagcaaatgtccgcctttgccgac
gaactccgctttgaagaagccgccgccgtccgcgacaaaatagaagaaataaaacgcctc
agcacctaa
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