Trifolium pratense (red clover): 123888714
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Entry
123888714 CDS
T08949
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
tpra
Trifolium pratense (red clover)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
TRCF
SNF2-rel_dom
RecG_dom3_C
Motif
Other DBs
NCBI-GeneID:
123888714
NCBI-ProteinID:
XP_045793814
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Position
LG6:10358268..10370463
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AA seq
840 aa
AA seq
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MASLLKPPQPISSPPSITKLTSYPKTFNFFIFNFNYPFHHKTIKKHFVLARPFFPLNAAY
TQGLYVPSPPSKTNKIELENDPISVLNKRIRREYGKKEVTRTVMDSEEADKYIQMVKEQQ
QRGLQKLKGDRESKDGTISYKVDPSTLRSGDYVVHRKVGIGRFVGIKFDVSKNTNEPTEY
VFIEYADGLAKLPVKQASKLLYRYSLPNEKQKPRSLNKLHDTSAWEKKKIKGKVAIQKMV
VDLMELYLHRLKQRRPPYPRSPAVAEFAAQFNYEPTPDQKQAFIDVEKDLTERETPMDRL
ICGDVGFGKTEVALRAIQCVVAAKKQAMVLAPTIVLAKQHFVVISERFSVYPDIKVGLLS
RFQNRSEKELALEMIKNGDLDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKERIAS
FKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTELSSFSKEKVISAIKY
ELDRGGQVFYVMPYIKGLEEATEFLEEAFPDVEIAVAHGKQFSKQLEDSMEKFAQGEIKI
LISTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVGRAEKEAYAYLFYPDKSMLSD
QAAERLAALEECRELGQGFQLAERDMGIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLS
KVEDHRVVSVPYHSVQVDLNINPHLPSEYINHFENPMEIINEAERNAEKDIWSLMQFTED
FRRQYGKEPHPMEIILKNLYLRRMAADIGVTRIYSEGKIVFMKTKMSKKVFKIMIESMTS
DIYKDSMVLEGDQIKVELLLELPKEQLLNWIFNCMAELHASLASLIKVLVFCLFSFTNIA
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcttctcaaacctccacaacccatttcctcacccccctccattaccaaactc
acctcttacccaaaaacattcaacttcttcattttcaacttcaactacccttttcaccat
aaaaccatcaaaaagcactttgttctagcaagaccctttttccctctcaatgcagcctac
acacaaggactctatgtcccttctccaccctccaaaactaacaaaattgagcttgaaaat
gaccctatctcagtcctcaacaagagaattcgtcgcgaatacggtaaaaaagaggttaca
aggactgttatggactctgaggaagctgataagtacatacaaatggtgaaggaacaacag
cagagggggcttcaaaagcttaaaggtgatagagagagtaaagatggtaccattagttat
aaggtagacccttctacacttcgttctggtgactatgttgtgcataggaaagttggtatt
ggaaggtttgttgggattaaattcgatgtttcgaagaatacaaatgaacctactgagtat
gttttcattgagtatgctgatggattggcaaagcttcctgttaaacaggcttctaaactg
ctttatagatatagtcttccaaatgaaaaacaaaagcctaggtcattgaacaagttgcat
gatactagtgcttgggagaaaaaaaagattaaaggaaaggttgcaatacagaagatggtt
gttgacttgatggaactctatctgcataggcttaaacaaagaaggcctccctatcctagg
agtcctgccgtggctgaatttgcagcgcaatttaattatgaacctacgccggatcagaaa
caggcttttattgatgttgagaaggatctgacagaacgagaaactccaatggacagatta
atttgtggagatgttggttttggtaaaactgaggttgcgctgcgtgctatccaatgtgtt
gtcgcagctaaaaagcaagcgatggttctcgcaccgacaatagttctagcaaaacaacat
tttgttgttatttcagagcgcttttctgtatatcctgatattaaagttggactgcttagc
agatttcagaacagatcagaaaaagaactggccttggaaatgattaagaatggtgatcta
gatattatagttgggactcattcactcctaggaaaccgtgttgtttataacaatcttggc
ctgcttgtggtcgatgaggaacagaggtttggtgtcaaacagaaggagaggattgcttct
tttaaaacttccgtggatgtacttactttatctgcaacccctataccacggactctttat
ttagctttgacaggatttcgcgatgctagtttaatttcaactccaccgccagaaagagtt
cctatcaagactgagctttcatcattcagtaaggagaaagtaatatcagccatcaagtat
gagctggaccgtggtggtcaagttttttatgttatgccatatattaaaggacttgaagaa
gcgacggaatttcttgaagaggcattccccgatgtggaaatagccgttgcccatgggaag
caattctcaaagcaattagaggattccatggagaagtttgctcaaggtgaaataaaaatc
cttatcagtacaaatatagttgaaagtgggcttgatattcaaaatgcaaacaccatcatc
attcaggatgttcaacaatttggccttgcacagttgtaccagttgcgtggaagagttggg
cgggcagagaaggaagcttatgcatacttattttatcctgataagagtatgctctctgat
caagccgcggagaggcttgcagctcttgaagaatgccgtgaacttggtcaaggcttccaa
ctagctgagagagatatgggtataagaggttttggtactatttttggcgagcagcaaact
ggagatgttggaaatgttggcattgatcttttctttgagatgctctttgagagcttatcc
aaggttgaagatcaccgtgttgtatcagttccttatcactcggtgcaggttgacttaaat
atcaatcctcaccttccttcagaatacataaatcatttcgagaaccctatggaaattatt
aatgaagctgagcgaaacgctgagaaagacatttggagtctgatgcaatttacagaggat
tttcgccgccaatatggcaaagaacctcacccgatggagattatcttaaagaatctttac
ttgaggagaatggcagctgatataggggtaactagaatttactctgaagggaagatagtg
tttatgaaaacaaagatgagtaaaaaggttttcaaaattatgatagagtcaatgacatcg
gatatatataaagattcaatggttcttgagggggatcaaattaaggttgaacttctatta
gagctgccaaaagaacaacttcttaattggatctttaattgcatggctgaacttcatgct
tcgctagcatccctcataaaggtactagttttttgcctgttcagtttcaccaacattgca
tga
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