Trifolium pratense (red clover): 123890313
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Entry
123890313 CDS
T08949
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpra04131
]
123890313
Membrane trafficking [BR:
tpra04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
123890313
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
TPR_2
DUF6304
Motif
Other DBs
NCBI-GeneID:
123890313
NCBI-ProteinID:
XP_045795851
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Position
LG6:complement(5393962..5413724)
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AA seq
1288 aa
AA seq
DB search
MDPARTPLGQMLLEEITPVVMVLSTPSVEETCLKNGFSFLQMLTPFCSFNNIDVPVRTAS
DQPYRIHKFKLRLFYGSNVRKPDLKVAEEQLMQVITESGEKVFSELCSDAPKINQEHASS
EDRNTPSWFQFFNKELVRMASFSDHEAFDHPVACLLAVSSKDEHPVSRFIDLFNTNKLPS
LLKDGAMDPKILKHYLLVHDNQDGSADRASKILTEMRNTFGASDCVLLSINSSPDAPIKH
QDNPWASQICDASPDQDLGCFLNIDDINEIKDLMQDLSSKHIIPNMEQKIRVLNQQVSAT
RKGFKNQIKNLWWRKGKEDGVDSLNGPMYNFNSIESQIRVLGDYAFMLRDYELALSNYRL
ISTDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGFVGQQNATRC
GLWWIEMLKARDLFKEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMSRKYGFHLVL
SGEQYKKCDQIKHAIRTYRSALSVFRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMTE
ILACSHQSKTTQELFLGDFLQVVEKTGHTFEVTKLQLPVINISSLKVIFEDHRTFGSPSA
VNTKEGLWHSLEEDMIPSFTAAKTNWLELQSKLISKKNTQSNVCVAGEAVKVNIEFINPL
QITIPVSGVTLVCKYSTSTDELTSNANELSVKTDNEVDHFRDTSSHNSSFLVSEVDFSLG
GGETTMVQLSVTPKEVGTLEILGVRWKLSGAIVGFHNFELSHPKKNIVKGRRKAKQSPNE
KFKFMVIKSIPKIQGTIQSLPGKAYAGDLRQLMLELRNPSEFPVKNLKMKISHPRFLIVG
NQENVKLEFPGCLTKKSDSVQSGAHANPNMMSETVFSFPADTSVQGETPLSWPLWFRAAV
PGDISLYMSIYYEIEDISSVIRYRTLRLHYNVQVLPSLDVSFQISPSRLRIQDFLVRLDI
VNKTSSESFQVYQLSSIGHHWEISLLQPPEAIFPSQTLMAGQAISCFFTLKNSRRLSTLE
HNISTLPLGSDVLLVPQCSEDLVYNTNNVPLVNFHYFERLQQKVLHEDLGDLNTVDLVLI
SRPLNSSISPGLSDPPHVMSHHTCHLSTASTGPISWLVDGPQTLHHDFSASFCEINLKMH
LYNSSDATAFVRIDTTDFDGSGGHMNSVNAIQSATPDNQAGWHDVTPVTEIKVTPNALEA
QPGKVVLLESVSPYIWSGSSSTNIHLEPMSSAEIPLQICVFSPGTYDLSNYVLSWKLPSQ
VLGDSDETKQHSGKCQGYKYYLTVLQST
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggatccggcgaggacgccactcggacaaatgctacttgaagaaatcacgccggttgtt
atggtcctttctactccttccgtcgaagaaacttgcttaaaaaacggattctcctttctt
cagatgcttactccgttttgctctttcaacaacatcgacgttccagtgagaaccgctagt
gatcagccttatcggattcataagttcaaattgcgtctcttctatggttctaatgttagg
aagcctgatttgaaggtagctgaagagcaattgatgcaagttatcacagaatcgggggag
aaagttttttcggagttgtgctctgatgcaccaaaaattaatcaggaacatgcgagctct
gaagacagaaatacaccatcctggtttcagtttttcaataaagagcttgtccgcatggct
tccttttcagaccacgaagcttttgaccatcccgtggcttgtcttttagctgtttcttca
aaagatgaacatccagttagcagatttattgacctttttaataccaacaagcttccttcc
cttctaaaagatggtgcgatggatccaaagattttaaagcattacttgttagtgcatgac
aatcaagatggctccgcagacagagcaagtaaaatattgacagaaatgaggaatacattt
ggtgcaagtgactgtgtcctgctttctataaattcttccccagatgctccaatcaagcat
caagataatccttgggcttcacaaatatgtgatgcctcacctgatcaagatcttggttgc
tttcttaacatcgatgatatcaatgagatcaaagatttaatgcaagatttatcatctaaa
cacatcattcctaacatggagcaaaaaatccgtgtgctcaatcaacaggtttctgcaaca
cgtaaaggttttaaaaaccaaataaagaatttatggtggagaaaagggaaagaagatggt
gtagattctctcaatggtcctatgtataactttaactcaattgaatcccagattcgagtt
ttgggtgactatgctttcatgttacgagactatgaacttgccttgtcaaactatcgccta
atttcgacagattacaagattgataaagcctggaagcgttatgctggtgtgcaggaaatg
atgggacttacgtacttcatgttggatcaatcaagaaaagaagctgagtattgcatggaa
aatgcttttaacacatatttaaaacttggatttgtgggtcagcaaaatgctacacgatgt
ggtctgtggtggatagaaatgttgaaagcacgagatctttttaaggaggcagctacagtt
tactttcgtatttgtggtgaggatatcctacattctgctgtgatgcttgaacaagcatcg
tactgttatttgttgtctaaaccctccatgtcacgcaaatatggatttcatctagttctt
tctggggagcagtataaaaagtgtgaccagatcaagcatgcaattcgaacatacagaagc
gctctttcagtttttagaggaactacttggagttatattaatgatcatgttcatttccat
ataggacagtggtatgcttctcttgggatgtatgatgtagctgtcaaacatatgacagaa
attttggcctgtagtcaccagtccaagacgacacaagaattattcctaggcgacttcctt
caagttgtggagaaaacagggcacacatttgaggtaacaaaacttcaattgcccgtgatc
aacatctcttcactcaaggtcatctttgaagatcatcgaacttttggatcaccttcagct
gttaacactaaagaaggcttgtggcattctttggaggaagacatgataccatcatttact
gctgccaagactaattggttggagttgcaatcaaagcttatctcaaaaaagaacactcaa
tcaaatgtttgtgttgcaggagaagctgtgaaggttaatattgaattcataaaccctctg
caaattacaattcccgtatctggtgttacacttgtatgcaaatattctactagtactgat
gaacttacatcaaatgcaaatgaattgagtgtgaaaactgataatgaagttgaccacttc
cgggatacgagctcacacaattcctcctttttagtatccgaggttgatttctcactagga
ggtggtgaaactaccatggttcaactatcagtgactcccaaggaagtaggtactcttgaa
attcttggtgttcgatggaaactatcaggtgcgatagttggctttcacaactttgagttg
agccacccgaagaagaatattgtaaaaggaagaagaaaagcaaagcagtcgcccaatgag
aaatttaaatttatggtgatcaagagtatacccaagattcagggtactatccaatcttta
cctggaaaggcatatgctggagatttacggcaacttatgctggagttgaggaatccatca
gagtttcctgttaagaatctgaagatgaagataagtcaccctagattcctgattgttggg
aatcaagaaaatgtgaaattagagtttcctggttgcttaacaaaaaagtcagattcagtg
caaagtggtgcacatgctaatcctaatatgatgtctgaaacagtcttttcgtttccggcg
gacacttcagttcaaggtgaaacacccttatcatggcctctttggtttagggctgctgtt
cctggtgacatttctctttatatgagcatttattatgagattgaagatatatctagtgtc
attagatatcgcactcttcgcttgcattacaatgtgcaggtattaccatcattagatgtc
tcatttcaaatcagtccttctcgattaagaatacaagattttcttgttagattggatatt
gttaacaagacaagctcagaaagtttccaagtttatcagttgtcatctattgggcatcac
tgggaaatatcattacttcaacctcctgaggctattttcccttcgcaaacgctgatggct
ggtcaagccatatcatgtttcttcacattgaagaattcaaggagattatcgacgttggaa
cacaacatatctaccttgcctctcggaagtgatgtgttattggttcctcaatgcagtgag
gatttagtttacaatacaaacaatgtacctttggtcaatttccactattttgaaagattg
cagcagaaagtgttacacgaggatctaggtgacttaaataccgttgatttggtgttgatc
tctcggcctctcaacagtagcatcagccctggtttatccgatcctcctcatgttatgtct
caccatacatgtcacttaagtactgctagcacgggccccatttcatggctagtggatgga
cctcaaaccttgcatcatgacttctctgcatccttctgcgaaataaatctaaagatgcat
ctttacaattcatctgatgccactgcttttgtgcgcattgacaccacagattttgatggt
agtggtggacatatgaacagtgtgaacgcgattcaatcagcaactcctgataaccaagca
ggatggcatgatgtcacaccagtgactgaaatcaaggtaactcccaatgctctcgaagcc
caaccaggaaaggtagtattattggaaagtgtttccccatacatttggtctggatcaagc
tcgaccaatatccaccttgagcccatgtcctcagcagaaattcctcttcagatctgtgtc
ttctctccagggacatatgacctgtcaaattatgttttgagttggaaacttccatcccaa
gttctgggagacagtgatgaaaccaagcagcattcgggcaagtgccagggctataaatac
tatttgactgtgcttcagtccacttga
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