Trifolium pratense (red clover): 123892887
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Entry
123892887 CDS
T08949
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123892887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123892887
04147 Exosome [BR:
tpra04147
]
123892887
04090 CD molecules [BR:
tpra04090
]
123892887
Enzymes [BR:
tpra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123892887
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123892887
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123892887
CD molecules [BR:
tpra04090
]
Proteins
123892887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_16
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA_21
AAA_5
AAA_15
nSTAND1
SbcC_Walker_B
AAA_25
APS_kinase
DUF87
Rad17
Motif
Other DBs
NCBI-GeneID:
123892887
NCBI-ProteinID:
XP_045798721
LinkDB
All DBs
Position
LG6:7662936..7669585
Genome browser
AA seq
1330 aa
AA seq
DB search
MSKESEEIKTSGEQWKWSEMQGLELVNDDNNSDPFKGNLPTVIEEGVSQNQVQVSKEMVE
TSEAKKEEKVVKSVPAVGFGELFRFADGLDYILMTIGTVGAIVHGCSLPIFLRFFADLVN
SFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAA
LKQDIEFFDTEVRTSDVVAAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQL
ALVTLAVVPMIAVIGAIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGESRAL
QGYSSALKVAQKLGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHETNGGLAIAT
MFAVMIGGIGLGQSAPSMAAFTKARVAAAKIFRIIDHSPGIDRNSESGLELETVTGLVEL
KNVDFSYPSRPDVLILNDFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVMLD
GHDIKTLKLKWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFII
KLPDGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALD
RFMIGRTTLVIAHRLSTIRKADLVAVIQQGSVFEIGTHDELFSKGENGVYAKLIKMQEVA
HETAMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDASYPN
YKHEKLAFKDQAGSFWRLVKMNSPEWLYALIGSIGSIVCGSLSAFFAYVLSAVLSVYYNP
DHKHMIREIDKYCYLLIGLSSTALIFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAW
FDQEENESARISARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIA
VFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSESKIVRLFASN
LETPLQRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMV
SANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDQDATPVPDRLRGEVELKHVDF
SYPTRPDMPVFRDLNLRIRAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIR
KYNLKSLRRHISVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPAG
YKTFVGERGIQLSGGQKQRIAVARAFLRKAELMLLDEATSALDAESERSVQEALDRASTG
KTTIIVAHRLSTIRNANVIAVIDDGKVAEQGSHSQLMKNHQDGIYARMIQLQRFTHNEVI
GMASSSTSST
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagaatctgaagaaattaaaactagtggtgagcaatggaaatggtctgaaatg
caaggtcttgagcttgtgaatgatgataacaattctgacccttttaaagggaacttacca
acagtaatagaagagggtgtttctcagaatcaagttcaagtttccaaggaaatggtggaa
acatcagaagctaagaaagaggagaaggttgttaagagtgttcctgctgttgggtttgga
gagttattcagatttgctgatgggttggattatattctaatgactattggaactgttgga
gcaattgttcatggttgttctttgcctatttttcttagattctttgctgatcttgttaac
tcttttggttccaatgctaataatttggataagatgacacaagaagttgttaagtatgca
ttttacttccttgtggtgggtgctgctatttgggcatcttcatgggcagagatttcgtgt
tggatgtggaccggagagcgtcaatcaacaaagatgaggatcaagtatctggaagctgca
ttgaaacaagacattgaattctttgacaccgaagttcgaacttctgatgttgttgctgca
atcaacactgatgctgtgatggttcaggatgccattagtgagaagttgggaaatttcatt
cactacatggctacttttgtttctggttttgttgttggattcactgctgtttggcaattg
gctttggttacccttgctgttgttcctatgatagctgttattggagccattcacaccact
actttggctaagctctctagtaaaagccaagaagctctttctcaagctggcaacattgtg
gaacagacggttgtgcaaatccgtgtagtgttggctttcgttggtgagtctcgagcacta
caaggctactcatcagccttgaaggttgctcagaagcttggctacaaaacaggattagca
aagggaatgggattaggtgcaacttactttgttgttttctgctgctacgcgcttctgttg
tggtatggaggctatcttgtaaggcatcacgaaaccaatggaggacttgccattgcaacc
atgtttgctgtcatgattggtggaataggcttggggcaatctgcacctagcatggctgca
tttacaaaggcgagggttgctgcggctaagattttccggataatcgatcacagtcctggt
atagatagaaacagtgaatcaggattggaattggagacagttactggacttgtggaactt
aaaaatgtcgacttttcttatccatctaggcccgacgttctgatcctcaatgatttctcc
ttgagtgttcctgccggaaagaccatagctttagtcggtagcagtggctccggcaagagc
actgttgtttcccttattgagaggttctatgacccaacttcaggacaagttatgctagat
ggtcatgacattaaaactttgaagcttaaatggttgaggcaacagataggactagtgagc
caagaacctgctttgttcgctaccacgattcgagaaaatatactcttgggaagacctgat
gcaaaccaggttgagattgaagaagctgctagggttgctaatgctcattcgttcatcatc
aaacttcctgacggctatgaaactcaggtaggagaaagagggttacaactttctggaggg
caaaaacaaagaatagcaatagcaagggcaatgttaaaaaatccagcaattcttctccta
gatgaggcaacaagtgcattggactctgaatcagaaaaactggtgcaagaagcacttgac
cggttcatgatcggaagaacgactcttgtaattgctcatcgcctctccacaattcgcaaa
gctgacctcgtagctgtgattcaacaaggaagtgtttttgaaattggaactcatgatgag
ctcttctctaaaggtgaaaatggagtctatgccaagcttattaagatgcaggaggttgcc
catgaaactgctatgaataatgctagaaagagtagtgcaaggccttcaagtgcaagaaac
tcagttagctcgccgataattgcgaggaattcttcttatggccggtcaccgtactcacgt
agattgtccgatttctctacatcagattttagtttgtcccttgatgcatcatatccaaat
tacaagcatgaaaagcttgccttcaaagatcaagccggttccttctggagactagtaaaa
atgaactctcctgaatggctctatgctttaattggttcaatcggctcaattgtttgtgga
tcgcttagtgctttctttgcttatgttcttagtgctgtcctcagtgtctattacaatccg
gaccacaaacacatgatccgagaaatagataagtactgctacttattgattggtctttca
tcaactgcacttatcttcaacacattgcaacacttcttctgggatattgtcggggaaaat
cttacgaaacgtgtgagggagaaaatgctgactgcagtgcttaagaatgaaatggcatgg
tttgatcaggaggaaaatgagagtgctaggatttctgcaaggctggctctcgatgccaac
aatgtcagatcagccattggagaccgaatttcagtcattgtgcagaatactgcacttatg
cttgttgcttgtactgcaggttttgtgttgcagtggcgtctcgcccttgtcctcattgct
gtattccctgttgttgttgcagccactgttttgcagaaaatgttcatgactggtttctct
ggtgacctagaagctgctcatgccaaggccacacaactagctggagaggctatagccaat
gtaagaactgttgcagccttcaactcagaatcgaaaattgttcgccttttcgcctccaac
cttgaaactccactacaaaggtgcttttggaagggacagatttccggaagtggatatgga
atagctcagtttgcactttatgcttcttatgcacttggtctttggtacgcttcttggcta
gtgaaacacggaatatccgacttctctaaaacaatccgagttttcatggtcctcatggtc
tctgccaatggtgctgccgagactttaacactggctcctgacttcatcaagggaggtaga
gccatgagatcagtttttgatctcctcgaccgtcgaaccgagattgaaccagatgatcaa
gatgctactccagttcctgaccgtctccgcggtgaagttgaacttaagcatgtggacttc
tcttatcccactagacccgatatgccggttttccgtgaccttaatcttcgtatccgagct
ggcaaaacgcttgcccttgttggacctagtggctgcggtaagagctcggtgattgcactt
atacagagattctatgatccaacgtctggccgggtaatgattgatggaaaagacatcaga
aaatacaacctcaaatccttaagaagacacatttctgtagtacctcaagagccgtgcctc
tttgctactactatttatgaaaatattgcatatggccatgactcagcaacagaagccgag
ataatcgaagcagcaacacttgctaatgctcacaagttcatatcttctctaccagccgga
tacaaaacatttgtaggggagagaggcattcaactctccgggggacaaaaacaaagaata
gcagttgctcgtgcttttttgaggaaagccgagcttatgcttcttgacgaggcaacaagt
gcacttgatgctgagtcagagaggtctgttcaagaggctctagaccgcgcttcaacgggg
aaaacaaccatcattgttgcacatagattatcaactataaggaatgccaatgtgatcgct
gtgattgatgatggtaaagtagctgaacaaggttcacattcacagttgatgaaaaatcac
caggatggaatatatgcgcgcatgattcaattacaaaggtttacacacaatgaggtaatt
ggtatggcatctagttcaacttcttcaacatga
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integrated database retrieval system
