Trifolium pratense (red clover): 123894009
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Entry
123894009 CDS
T08949
Name
(RefSeq) transcription initiation factor IIA large subunit-like isoform X1
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123894009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpra03021
]
123894009
Transcription machinery [BR:
tpra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
123894009
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
123894009
NCBI-ProteinID:
XP_045799822
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All DBs
Position
LG7:complement(55382550..55387175)
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AA seq
387 aa
AA seq
DB search
MAAAASSTSQVYIDVIEDVMTKVRDEFVNNGGPGEEVLRELQAIWESKMMQAGAVVGPIE
RTNGPNKPTPPVHDLNVPYEGNEEYETPTAEILFPPTPLQTPIQTPLPGTGETPSYNIPT
GQSDYSSGNDTGANADLKGGRTGPYMQPPSPWMMNQRPPLDVNVAYVEGRDEADRGASNQ
PTTQDFFQMPGGKRKRNDLPPPYDAGGYIPQQDGAGDVVSGDFEIEVCGGSISFSSQHTN
SKGKIPANLERLASSSRIPQLDGPIPYEDDVLSTPNIYNYGGVYSEDYNIANTPAPPEVP
VSTPALVAQNEVVNDDEDDEPPLNENDDDDLDDLDQGDDQNTSHLVLAQFDKVTRTKSRW
KCTLKDGIMHINNKDILFNKANGEFDF
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgcttcatccacaagccaggtttatatcgatgtaatcgaagatgtcatg
accaaagttcgcgatgagtttgtcaacaacggtggtcctggtgaagaagttctccgagag
cttcaagccatttgggaatcgaagatgatgcaagctggtgcagtggttggtccaattgag
aggactaatggaccgaataaaccgacacctccggttcatgatcttaatgttccgtatgag
ggaaatgaggagtatgaaactcctactgctgagatactctttcctcctacgccattgcaa
actccgattcaaactcctttacctggaactggggagaccccgtcatataatattcctact
ggacagagtgactactcttctgggaatgatactggtgcaaatgctgatctgaaaggtgga
agaacaggcccttacatgcaacctccttctccttggatgatgaatcagaggcccccactt
gatgtcaacgttgcttatgtggaaggacgggatgaggcagatagaggagcttcgaatcaa
cctacgacacaggacttcttccaaatgcctggtggaaagcggaaacgcaatgatttgcct
ccaccatatgatgctggaggatatatacctcagcaagatggagctggtgatgttgtgtct
ggcgattttgaaattgaggtatgtggagggagcatctccttcagttcacaacacactaac
tcaaaagggaaaattcccgcaaatttggagagactggcttctagttctaggattcctcaa
cttgatggaccgattccttacgaggatgatgtgctttctactccaaatatttacaattat
ggtggagtttacagtgaagactacaacattgcaaatacaccagctcctcctgaagtacca
gtaagcacacctgctctcgtagctcaaaatgaggtggtaaatgatgatgaagatgatgag
cctccactaaatgaaaatgatgatgatgatttggatgacttggaccaaggagatgatcag
aatacaagtcatctcgttttggcccaatttgacaaggtgacacgtaccaagagcaggtgg
aaatgcacattaaaggatggcatcatgcacataaataacaaggatattctcttcaacaag
gcaaacggagagtttgacttctga
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