Trifolium pratense (red clover): 123895338
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Entry
123895338 CDS
T08949
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123895338
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
123895338
REST complex
123895338
Heterochromatin formation proteins
Other heterochromatin formation proteins
123895338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
Mann_GBD_bact
TPPII_C
Motif
Other DBs
NCBI-GeneID:
123895338
NCBI-ProteinID:
XP_045801552
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Position
LG7:26213316..26226292
Genome browser
AA seq
1416 aa
AA seq
DB search
MKRSRDDVYMSSQLKRPVLSSRGEPSGQPQVMSGGQKLTTNDALSYLKAVREMFQDDKEK
YDEFLEVMKDFKAQRIDTAGVIERVKELFKGHKDLILGFNTFLPKGYAITLPSENEPPPL
KKPVEFEEAINFVGKIKTRFQGNDRVYKTFLDILNMYRKETKTITVVYQEVSALFQDHAD
LLEEFTHFLPDTSGAAAAHFASARNSLRDRNSAMATVRQTHVEKREKTIALHADRDLGVD
HSDPELERGVMRVDKEQRRREREKDRREERDRRERDDRDYDNDGNRDRLSHKRKSGHRAI
DAGTEPSHDADEKLDMHPISSASEDKSSLKSMCSPVLAFLEKVKEKLRNPEDYQEFLKCL
HIYSREIITRSELLALVGDLLGKYADIMEGFDDFVTQCEKNALASALKKYYGIDSSESLW
NEGHGPKPVKVEDKDRDRDRDDGVKERDRELRERDKSTGIANKDVSIPKVSLSKDKYVGK
PINELDLSNCEQCTPSYRLLPKNYPIPIASQRTELGDEVLNDHWVSVTSGSEDYSFKHMR
KNQYEESLFRCEDDRFELDMLLESVNVTNKKVEEILDKVNANIIQGDIPIRIEEHLTPLN
LRCIERLYGDHGLDVMDVLKKNASLALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNY
HKSLDHRSFYFKQQDTKSLSTKALLGEIKEISEKKRKEDDVLLAIAAGNRRPILPNLEFE
YPDPDIHEDLYQLIKYSCGEVCTTEQLDKVMRIWTTFLEPMLGVPSRRRVAEDTEDAVKA
KNDSAKTGTASIAKGDSSPGVGVTVMNPKNSNTNRNGDASVPFQQSNSCKEWQSNGVKGD
VCLESDRSALKNETLGSSTLQGKIHISASIPDEVSRVNKQDHSIEQLVNANVSLSSGMEQ
SNGRTNINNASGLAATLSRPGYVSSEGGLDLPSSEGADSTRPDTSTNGAITKDTKVQRCH
KESAGHFKSEREEGELSPNGDFEEDNFAVYANAGLEAVHKGKDCNTSQQYQNRHGKQICG
EAGGVNDDESDRSPHRSSDESENASENGDVSGTESADGEECSREEHEEDGDHEHDNKPES
EGEGEGMADANDFEGDGASLPYSERFLLTVKPLVKHVRPVLHGKEKNVQIFYGNDSFYVL
FRLHQTLYERIQSAKINSSSAERKWRASNDTCSTDQYGRFMNSLYSLLDGSSDNSKFEDD
CRAIIGTQSYVLFTLDKLIYKLVKQLQAVASATDEMDNKLLQLYAYEQSRKPGSFADIVY
HENARVLLHDENIYRIERSSTPTRLSIQLMDYGHDKPEVTAVAIDPNFSTYLHNDFLSVV
PDSKEKSGVFLRRNKLKCGWSDEFSSQAIDEVQVINGLECKISCNSSKVSYVLDTEDSLF
RAKKKRRTLQTYREQTMSSNICSSRSQRFCKLFSIK
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtctagagatgatgtttacatgagttcacaactcaaacgtcctgtgctgtct
tctagaggagaaccctcggggcaaccccaagtgatgagtggtggtcagaagttaacgaca
aatgatgccttatcatatctaaaggcagtaagagaaatgtttcaagatgacaaagaaaag
tatgatgaatttttggaagtcatgaaggatttcaaggcccaaagaattgatacggctggt
gtcatagaaagagtgaaggagctttttaaagggcataaagatttaattttggggtttaac
accttcttgccaaagggatatgcaattacacttccatcggaaaatgaaccacctccactg
aagaagcctgttgaatttgaagaagctatcaattttgttggcaagatcaagactcgtttt
cagggcaatgatcgtgtttacaagacttttttagacatattaaatatgtacagaaaggaa
accaagactatcaccgtggtttaccaagaggtctctgccctcttccaagaccatgcagat
cttcttgaggagttcactcattttcttcccgacacttctggagcagccgctgctcatttt
gcttctgctcgtaattctctccgtgataggaactctgcaatggcaacagtgaggcaaaca
catgttgaaaagagagaaaagacaatagctttgcatgctgatcgtgatctcggcgttgat
cattctgatccagaacttgagagaggtgtgatgagggttgataaggagcagagaagacgc
gagagagaaaaggaccgtagagaagaaagagataggagagaaagggatgatagagattat
gataatgatggtaatcgggaccgtttatcccacaagcgaaaatctggtcatagagctatt
gacgctggtactgaaccatcacatgatgcagatgaaaagcttgacatgcaccctatctca
tccgcttccgaggataaaagttctttgaaaagtatgtgtagtccagtgcttgctttcctt
gaaaaagtcaaggagaagttaagaaatcccgaggattaccaggaatttttgaagtgccta
catatctacagcagggaaataatcacccgatcagaactactggcattggtgggtgattta
ctgggaaaatatgctgatattatggagggatttgatgattttgtgacacaatgtgaaaag
aatgctttagcttctgctctaaaaaaatattacggtattgattcatcagaatccttgtgg
aatgaaggacatggaccgaaaccagtgaaggtagaggacaaggacagagatcgggacagg
gatgacggggtgaaagaaagggaccgtgaactccgagaaagagacaaatccactggaatt
gccaacaaggatgtttctattcctaaggtgtctttaagcaaagacaagtatgtaggaaaa
cctataaatgaattggacctttctaactgtgaacaatgtactcctagttaccgtcttcta
ccaaaaaattacccaataccgatagctagccaaagaactgaacttggtgacgaagtattg
aatgatcactgggtctctgttacatcaggaagtgaggattattcctttaaacacatgcgc
aaaaatcagtatgaagagagcttgtttagatgcgaagacgacaggtttgaacttgatatg
ttgttagagtctgtaaatgtgacgaataagaaagttgaagagatcttagacaaagttaat
gctaatataattcaaggagacatcccaattcgtatcgaggagcacttaacacccctaaat
cttaggtgtattgaacgattatatggtgaccatgggcttgatgtgatggatgtgttgaaa
aagaatgcatctctagctttgccggtgatattaacccgcttgaagcagaaacaggaggag
tgggcaagatgccgtgcagattttaataaagtttgggctgaaatatatgcaaagaattat
cacaaatcacttgatcaccgaagcttttactttaagcagcaggatacaaaaagcttgagc
actaaagccttattgggagagatcaaagaaattagtgagaagaaacgaaaagaagatgat
gttcttcttgcaattgctgctggaaatagacggccgattcttcctaacttggaatttgag
tatcctgatccagatattcacgaagatttgtatcaactcataaaatattcatgtggagaa
gtttgtacaaccgaacaattggataaagtcatgaggatttggacaacatttttagaaccc
atgcttggtgttccttctcgacggcgcgttgccgaagacacagaagatgctgtcaaggct
aagaatgattctgcaaaaactggcactgcaagtattgccaagggtgatagtagtcctggt
gttggtgtcaccgtaatgaatcctaagaattcaaacactaatagaaatggggatgctagt
gttccatttcaacaatcaaattcttgcaaagaatggcaaagtaatggggttaaaggggac
gtgtgtcttgaatcagaccgttctgcactcaagaatgaaactttgggaagtagtacactg
caaggtaaaattcatataagtgcatccattcctgatgaagtatcaagagtcaataagcaa
gatcattccattgaacagttagtgaatgctaatgtatcactgtcctctggaatggagcaa
agtaatggaagaacaaacattaataatgcatcaggacttgctgcaactctgtctcgacct
ggttatgtttctagtgagggagggcttgatttaccttcatcagagggtgctgattctaca
agaccagatacatccacaaatggggccatcaccaaagacaccaaagttcaaagatgtcac
aaagaatcagctggacacttcaaaagtgaaagagaagagggtgaattatcgcctaatgga
gactttgaagaggataactttgcagtttatgcaaatgctggtctggaggcagtgcataaa
ggaaaagattgtaataccagtcaacaataccaaaatagacatggaaaacaaatttgtggt
gaagctggaggtgtaaatgacgatgaaagtgatagaagtcctcatagatcatctgacgag
agtgaaaatgcatctgagaatggtgatgtttctggtacagagtctgctgatggtgaggaa
tgttctcgagaagaacatgaagaggatggggatcacgaacatgataacaagcccgagagt
gaaggtgaaggtgaaggaatggctgatgccaatgattttgaaggagacggagcctcattg
ccatattcagagcgctttcttctcactgtaaagcctctggtaaaacatgttcgcccagtg
ttgcatgggaaagagaagaatgttcaaattttttatggaaacgattccttttatgtactg
tttagacttcatcagacattgtatgagaggatacaatccgcaaaaattaactcatcttct
gctgaaaggaaatggagagcttcaaatgatacatgttctactgatcaatatggcaggttc
atgaattctctttacagtttactggatggttcttctgataactcaaaatttgaggatgac
tgtcgagctattattggaactcagtcatatgtcttgttcacgttagacaagctgatatat
aaacttgttaaacagcttcaagctgttgccagtgccactgatgagatggataacaaactt
cttcaactatatgcatatgagcaatcaagaaaacccggaagctttgctgatatagtttat
catgaaaatgcccgtgttcttcttcatgatgagaacatatatcgtattgagcgttcctct
acaccgactcgactgtctattcagttgatggattatggacatgataagcctgaagtgact
gctgtggcaatagatcctaatttttcaacatatctgcacaatgatttcctatctgttgtc
cctgacagtaaggagaagtcaggagttttcttaagaaggaataagctaaaatgtggctgg
agtgatgaattttcaagccaggccatagatgaagtacaagttatcaatggtctggagtgt
aagatttcttgcaattcatccaaggtttcatatgttttagataccgaggactctttattt
cgagcaaaaaagaaaaggagaactttgcaaacatatcgtgaacagacaatgtcttcaaac
atttgttcaagcagatcacagcggttctgcaaattattttccatcaagtga
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