Trifolium pratense (red clover): 123906409
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Entry
123906409 CDS
T08949
Name
(RefSeq) ABC transporter B family member 19
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123906409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123906409
04147 Exosome [BR:
tpra04147
]
123906409
04090 CD molecules [BR:
tpra04090
]
123906409
Enzymes [BR:
tpra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123906409
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123906409
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123906409
CD molecules [BR:
tpra04090
]
Proteins
123906409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_16
Zeta_toxin
AAA_22
AAA_21
AAA_15
nSTAND1
DUF87
AAA_23
Glyco_transf_22
DUF4044
Motif
Other DBs
NCBI-GeneID:
123906409
NCBI-ProteinID:
XP_045812265
LinkDB
All DBs
Position
LG2:4244886..4254594
Genome browser
AA seq
1250 aa
AA seq
DB search
MAEASDVKASLPEAEKKKEQSLPFYQLFSFADKYDYFLMISGSIGAIIHGSSMPVFFLLF
GQMVNGFGKNQMDLKKMTDEVSKYALYFVYLGLVVCMSSYAEIACWMYTGERQVSTLRKK
YLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFV
SAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVG
ESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGG
KAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIVEDLLDGKCLAEVN
GNIEFKDVSFSYPSRPDVMIFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNDG
QVLLDNVDIKTLQLKWLRDQIGLVNQEPALFATTIRENILYGKPDATNDEIEAATSAANA
HSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIV
QEALDRLMIGRTTVVVAHRLSTIRNVDSIAVIQQGVVVETGTHEELFAKGGTYASLIRFQ
EMVGNRDFSNPSTRRNRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAET
DKKNPAPDGYFFRLLKMNAPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYYRNYAS
MEKKTKEYVFIYIGAGIYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEE
EHNSSLVTARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPL
LVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKMLSTFCHELRVP
QSQSLRRSLTSGLLFGLSQLALYASEALILWYGAHLVSKGLSTFSKVIKVFVVLVITANS
VAETVSLAPEIIRGGEAVGSVFSILDRSTRIDPDDPDAELVESVRGEIELRHVDFAYPSR
PDVMVFKDFSLRIRAGQSQALVGASGSGKSSVIALIERFYDPIVGKVMIDGKDIRRLNLK
SLRLKIGLVQQEPALFASSIFDNIAYGKEGATEAEVIDAARKANVHGFVSGLPEGYKTPV
GERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVL
VAHRLSTIRGVDCIGVVQDGRIVEQGSHSELISRPEGAYSRLLQLQHHHI
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcttctgatgttaaagcttcattgcctgaagcagagaagaagaaagaacaa
agtttacccttttatcagcttttctcatttgctgataaatatgattattttcttatgatc
tctggtagtattggtgccattattcatggttcttctatgcctgttttttttcttcttttt
ggtcaaatggttaatggttttggtaaaaaccaaatggatttgaagaaaatgactgatgaa
gtttccaagtatgcactttactttgtgtaccttggccttgttgtttgtatgtcatcttat
gcagagattgcatgttggatgtatactggagagagacaagttagcaccttgaggaagaag
tatttggaagcagtacttaaacaagatgttggtttctttgatacagatgctagaacagga
gatatagttttcagtgtctcaactgatacactattagtccaagatgctattagtgagaag
gttgggaatttcatacattatctatcaacttttctggctggacttgtggttggttttgtg
tcagcatggagattagcacttcttagtgttgcagtgattcctggaattgcttttgctggc
ggattatatgcttatacactcaccggacttacatcgaagagtcgcgaatcatatgcaaat
gctggcataattgctgaacaggcaattgctcaagttcgaactgtttactcttatgtcggt
gagagtaaggcgctgaattcttattctgatgcaatacaaaacacattgaagcttggatac
aaggcaggaatggctaaaggtttaggcctaggatgcacgtatggtatagcttgcatgtcg
tgggcgctagttttttggtatgccggagtttttatcaggaatggacaaaccgatggaggc
aaggcattcacagctattttctctgccattgtcggtggaatgagtttgggtcagtcgttt
tcgaacttaggtgcgtttagcaaaggcaaagcagccggatacaaattgatggaaatcatc
aagcagaaaccaaccatagtcgaagatctgttagacggaaagtgcttagccgaggttaat
ggcaacattgaatttaaagatgttagtttcagctatccctcaaggccggatgtgatgatt
tttcggaatttctcaatctttttccctgccggtaaaaccgttgcggttgttggtggtagt
ggttctggaaagagtaccgttgtttccttgatcgaaaggttctatgatcctaatgacggt
caggttctgctcgataatgtggacattaagacactacaactaaaatggttacgcgatcaa
attggtttggtgaatcaagagcctgcgctatttgcaactacaattcgtgagaacatactg
tatggaaaacctgatgcaacaaatgatgaaattgaagccgcaacttctgctgcaaatgct
catagctttattacattgcttccgaatggctacaacactcaggttggagagcgaggagtt
caattatccgggggacaaaaacaaaggattgcaattgcgagagctatgttgaaaaatcca
aaaatccttctcttagacgaagcgactagtgctctcgatgcaggatccgaaagcatcgtt
caagaagcactagaccgtctcatgattggtagaactaccgtggtcgttgctcatcgttta
tcaacaattagaaatgtcgactctattgcagttattcaacaaggagtagttgtcgagacc
ggaacacatgaagaacttttcgctaagggaggtacttacgcttctctaattcgattccaa
gaaatggttggaaatagagacttctcgaacccttcaactcgtaggaatcgttcgtcgcgg
ttgagtcattcgctttcaacaaagtctttaagcttaaggtcaggaagcttgaggaacttg
agctaccaatacagcactggagccgatggtcgcattgagatgatctcgaatgccgaaacc
gataagaaaaatcctgctccggatggatatttcttccgattactcaaaatgaatgcgccc
gagtggccttactcgataatgggagctgttggatctattctttctggattcattggtcca
acttttgctattgttatgagcaatatgatcgaggttttttactatagaaactatgcatcc
atggagaagaaaactaaggaatatgtcttcatatacatcggtgccggtatttatgctgtt
ggtgcttacttgattcaacattacttttttagtatcatgggagaaaatctcaccacaaga
gttagaagaatgatgcttgcagctattttgaggaatgaagttggatggttcgatgaggaa
gagcacaactcaagtcttgttacagctcgtctcgctacggatgcagctgatgtgaagtca
gccattgctgagaggatatcagtaattttgcagaacatgacatctcttctcacttctttc
attgttgctttcattgttgaatggagggtttctttactcatccttggaactttccctctt
cttgttctagcaaattttgctcagcaactatctctcaaagggttcgccggcgacacagcg
aaggctcatgcaaagacaagcatgattgcaggagagggagtaagcaacatcagaactgtt
gcagcattcaatgcacaaaacaagatgctatccaccttttgtcacgagctacgtgtccca
cagagccaaagtctgcgccgaagtttgacatcaggactcttattcggcttatctcagtta
gccctttatgcatctgaagctcttattctatggtacggtgcacatttagtaagcaaaggc
ctttccacattctcaaaagtcatcaaggtatttgttgtcttggtgatcaccgcgaattct
gtggcagaaactgttagtcttgctcccgagataatccgtggtggtgaagctgttggttcg
gttttctcaatccttgaccgatcaactagaattgaccctgatgatcctgatgcagaactg
gttgaatccgttcgtggtgagattgaacttagacatgttgatttcgcatacccttctagg
cccgatgtgatggtgttcaaagatttcagccttagaattcgcgcaggtcagagtcaagct
cttgtcggggcaagtggttcagggaagagttctgttattgcattgatagaacgtttctac
gatccaattgttggtaaagtaatgatcgacggaaaggacattaggaggttgaatttaaag
tctttaaggcttaagattggtttagtgcaacaagaaccggcgttatttgcatctagcatt
tttgacaacattgcatatggcaaagaaggcgcaaccgaagctgaagtgatcgacgctgcc
cgtaaggccaatgtgcatggatttgtgagtggtttacccgaaggttacaagacgccagtc
ggtgaaagaggcgtgcaactctccggcggtcaaaagcaaaggattgctattgcaagagct
gttcttaaggaccctacaatacttttacttgacgaggcaacaagtgcgctcgacgccgaa
tccgaatgtgtactacaagaagccttagagagattaatgaggggtagaaccaccgtactc
gtggctcatcgtttgtctaccattagaggggtcgattgcattggtgtcgtgcaagatggt
cgcattgtcgagcaaggaagtcattctgaactcattagtaggccagaaggagcttattct
agactcttgcagctacaacatcatcacatttga
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