KEGG   Trifolium pratense (red clover): 123906555
Entry
123906555         CDS       T08949                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    123906555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123906555
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     123906555
SSDB
Motif
Pfam: HD HD_assoc_2
Other DBs
NCBI-GeneID: 123906555
NCBI-ProteinID: XP_045812443
LinkDB
Position
LG2:complement(5733273..5740542)
AA seq 470 aa
MGAYCNDTVSFPPRYDVVSSRDKHIHDNLHGNIFIDSLSLKFIDTEQFQRLRELKQLGFT
HLVYPGAVHSRFEHSLGVYWIASQSVEKLNSYQGMELGIDKFDIQSVKLAGLMHDVGHGP
FSHLFEREFLPQVISGSNWSHEQMSVKMVDYIVEEHHIDIDPQMLKRVKEMILASSEFAL
PRSSSEKRFLYDIVANGRNGIDVDKFDYIARDCRACGLGCNFEFQRLMETMRVLDDEICY
RAKDYLTIHKLFATRADLYRTVYTHPKVKAIELMVVDALVLANDYLQISSSIQDPAEYWK
LDDSIIKTIETSPCPELKEARELILRIRRRNLYQFCNEYAVPRDIMDNFKKVTPHDIVCS
QKNGGVMLKEEDVAVSNVKIDLTRGKDNPLESIHFFKDYESDEKFTIPDERISHLLPASC
QDMIVRVYSKKPELVEKISEAFENYQLKTYGIKAQVHSTPTKKRRYNSCI
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgggcgcatattgcaacgacaccgtttctttccctcctcgttacgacgtcgtttcatct
cgagacaaacacattcatgacaacctccatggcaacatcttcatcgattctctgagtttg
aagttcattgatactgaacagtttcaaaggcttcgtgaattgaaacaacttggtttcaca
cacttggtgtatccgggggctgtccattctagatttgagcattctcttggagtgtattgg
attgctagtcaatctgttgaaaagcttaatagctatcaaggcatggagcttggtattgat
aagtttgatattcaatcggtgaaacttgctggacttatgcatgatgttggacatggacca
ttcagtcacttatttgaacgcgagtttcttccccaagttatcagtggttctaattggtcg
catgaacaaatgtcggtcaaaatggttgattatatagttgaggaacaccatattgatatt
gaccctcagatgttaaaaagagtcaaggagatgatattggcgagctccgaatttgctctt
cctaggagctcaagtgagaaacgtttcttgtatgatattgttgcaaatggaagaaatgga
atcgatgttgacaaatttgattatattgctcgtgattgtcgagcttgtggtctgggatgc
aactttgaatttcagaggttaatggagaccatgcgggttttggatgatgagatttgttat
cgtgcaaaggactatcttactatccacaagttgtttgcgactcgtgctgatctgtataga
acagtttatacacatccaaaagtaaaggcaatagagcttatggtggttgatgcgcttgtg
ctagcaaatgattatttgcagatttcatctagcattcaagatcctgctgaatactggaag
ctggatgattcaataattaaaaccattgagacttctccctgtcctgaactgaaggaagct
agagagttgatcctgcgcattcgaaggcggaatctgtaccagttttgtaacgagtatgct
gttccaagggatataatggacaattttaagaaagtcactcctcatgatatagtttgttcc
cagaaaaatggtggagttatgttgaaagaggaggatgtagctgtttctaatgtcaaaatc
gatttgactcgtggaaaggataatcctcttgaaagcatccattttttcaaggattatgaa
agtgatgaaaaatttacaatacctgacgagcgcataagccacctgttgcctgcatcttgt
caagatatgatagtaagagtgtactcgaaaaagccagaactggtggagaaaatttcagag
gcatttgaaaattatcagctaaaaacatatggaatcaaagcacaggtacattcaacacca
acgaagaaacgtcgttacaattcatgtatatga

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