Trifolium pratense (red clover): 123907179
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Entry
123907179 CDS
T08949
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123907179
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123907179
04147 Exosome [BR:
tpra04147
]
123907179
04090 CD molecules [BR:
tpra04090
]
123907179
Enzymes [BR:
tpra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123907179
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123907179
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123907179
CD molecules [BR:
tpra04090
]
Proteins
123907179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA_22
RsgA_GTPase
AAA_21
Zeta_toxin
AAA_15
AAA_24
APS_kinase
DUF87
G-alpha
AAA_7
DEAD
AAA_25
AAA_30
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
123907179
NCBI-ProteinID:
XP_045813288
LinkDB
All DBs
Position
LG2:38502273..38508025
Genome browser
AA seq
1280 aa
AA seq
DB search
MDIDSASIQPVVEDTGSKQEGSEENKAKDEKTNTVPLYKLFSFADPLDRLLMFVGTIGAI
GNGISPPLMILLFGNMINAFGGSSSTKEVVDEVSKVSLKFVYLAAGTFVASFLQLTCWMI
TGERQAARIRGLYLQTILRQDVSFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFLQLF
ATFLGGFVIAFIKGWLLTVVMMSVLPLLVLSGAMMSMVITKASSSGQTAYSKAATVVEQT
IGSIRTVASFTGEKQAIAKYDQSLIDAYKTVVKEALASGVGFGSLYFVIIASYGLAVWFG
AKMIIEKGYTGGEVVTIIFAVLTGSMSLGQASPSLSAFAAGQAAAFKMFETIKRKPEIDA
YDTTGRKLDDIRGDIELREVCFSYPTRPDELIFNGFSLAIPSGTTVALVGQSGSGKSTVV
SLIERFYDPQAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATD
EEIRAAAELANATKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEA
TSALDAESERVVQEALDRIMVNRTTVIVAHRLSTIKNADTIAVVHQGKIIERGSHAHLTR
DPDGAYSQLIRLQEMKGSEQNDANDTNNSNSIVLSERRSSHRSLSLRSISQVSSGGGDSG
RHSFTASFGVPTTMVGFSETADGGTQAPPSKVSSPPEVPLYRLAYLNKTEVPALLIGTIA
AVLHGVILPVFGLLLSKMISIFYEPADELRHDAKIWASVFVGLGVASLFIFPTRFYFFGI
AGGKLIKRIRKMCFEKVIHMEVSWFDEAEHSSGAIGARLSTDAASIRALVGDALGLLVEN
IATAITGLVIAFVASWQLALVILALVPLLALNGFLQVKFLKGFSNDSKKLYEEASQVAND
AVGSIRTVASFCSEEKVMDLYKQKCEGPIKTGIRRGIVSGFGFGISFFMLYAVYATSFYA
GARLVEDGKSSFSDVFRVFFALSMAAIGLSQSGSMVSDSTKAKSAAASIFAILDRKSLID
PNDESGMTLEEVKGEIELKHVSFKYPTRPDVQIFRDLSLTIHTGKTVALVGESGSGKSTV
ISLIQRFYDLDSGHITLDGKEIQSLQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDA
SEAEIIAAAELANAHKFISSLQKGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLD
EATSALDAESEKVVQDALDRVMVERTTIIVAHRLSTIKGADLIAVVKNGVIAEKGKHEAL
LHKGGDYASLVALHISASTS
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggatatagattctgcaagtattcagccagtagtagaagatactggaagcaagcaagaa
ggttcagaggagaacaaagctaaggatgaaaaaaccaatacagtacctttatacaagctt
ttctcatttgctgatcctttggatcgtttattgatgtttgttgggactattggtgctatt
gggaatggaatctccccgcccttgatgattttattatttggaaatatgatcaatgcattt
ggaggatcatcaagcaccaaagaagttgttgatgaagtttccaaggtgtccttgaaattc
gtatacttggctgcgggtacctttgttgcgtcttttttgcaattgacttgctggatgatc
actggtgagagacaggctgcaagaattagaggtttatacctacaaactattttgaggcaa
gatgtgagtttctttgataaggaaactaatactggtgaggttgtcggaagaatgtctggt
gataccgttcttattcaagatgccatgggtgagaaggtgggacagtttctacagttattc
gctacattcttaggaggttttgtcatagcattcatcaaaggatggcttttaactgttgtc
atgatgtctgttcttccacttcttgtcttgtctggtgccatgatgagcatggttattaca
aaagcatcatccagtggacaaacagcttattctaaagcagcaactgtagtagagcagaca
attggttctatcagaactgttgcatcgttcaccggagagaaacaagccatagctaaatat
gaccagtccttaattgatgcttacaaaactgtagtgaaagaggccctagcttcgggtgtg
gggtttggttcactctactttgttattattgctagttatggtttggcagtatggtttggt
gcaaaaatgataatagagaaaggttatacaggaggggaagttgtgactataatttttgct
gtattgactggttccatgtctctgggacaggcatctccaagcttgagtgcttttgctgca
ggacaagctgcagcatttaagatgttcgaaacgattaaaaggaagccagaaattgatgct
tatgacacaaccgggcgaaagcttgatgatattcgcggagacatagagcttagggaggtt
tgctttagttatcctacaaggccagatgaactgatattcaatggattctctcttgcaata
ccaagtgggactactgtagctttggtagggcaaagtgggagtggaaaatccacggttgtc
agtttgatagagagattttacgatccacaagctggtgaagttctcattgatggtatcaac
ctcaaagaatttcaacttaaatggatccgacagaaaatcggcctagtcagtcaggaacca
gttctctttacttgtagcattaaggagaatattgcctatggtaaggatggtgcaaccgat
gaagaaatcagagctgcagcagaacttgctaatgccaccaaatttatagataaacttcct
cagggactagacacaatggttggtgagcatggaactcagctctccggaggtcaaaagcaa
agagttgcaattgcaagggcaattctgaaagatccaagaatcctacttcttgatgaagct
acaagtgcgcttgatgcggaatctgaaagagtagtacaagaggcattggacagaataatg
gtaaaccgaacaactgtcattgtagctcaccgcttaagcaccataaagaatgctgatacc
attgcggttgttcatcaaggaaaaataattgaaagaggttcacatgctcatctcacaagg
gaccccgatggagcctatagccagctcattaggctgcaagaaatgaaggggtcagaacag
aatgatgcaaatgacacaaacaactcaaacagtatagtgctatctgaaagacgatctagt
catagatctttatccttgagatctataagtcaagtatcatctggaggtggagacagcggt
cgtcactcattcacagcgtcatttggtgtgccgaccacaatggttggcttctcagaaacc
gcggatggtggaactcaagctcctccttcgaaagtttcttcaccaccagaagtgccactt
tatcgcctggcctatttaaacaagacagaagttcccgccttacttatagggacaatagct
gcagtgctgcacggtgtaatattaccggttttcggcctcttgctttcgaaaatgataagt
attttctacgagccagctgacgaacttcgtcacgatgcaaagatttgggcgtcagtattt
gttgggcttggtgttgcgtcattattcatttttccaactagattctacttttttggcatt
gctggaggtaagttgatcaaaagaataaggaaaatgtgttttgagaaggtaattcacatg
gaagtaagttggtttgatgaagctgagcattcaagtggagcaattggagcaaggctctca
accgatgcagcttcgattcgagctttggttggtgatgcactcggattactggttgaaaat
attgctacagctataactggcttggtaattgcttttgtagccagctggcagcttgctctt
gtaatccttgctttggtgcctctactagcacttaatggatttttgcaagtgaagttcttg
aaagggttcagcaatgattcaaagaaattgtatgaggaagcaagtcaagtggcgaacgat
gcagtgggaagtataagaacagttgcttctttctgttctgaagagaaggtgatggaccta
tataagcaaaaatgtgagggaccaattaagacaggcataaggcgagggatagtaagcgga
tttggttttgggatatcatttttcatgttgtatgcagtttatgcaaccagtttttatgct
ggagcgcgtctcgttgaggatggaaaatcttcattctcggacgtttttcgtgtatttttt
gctctaagcatggcagctataggactctctcaatccgggtcgatggtatctgattcaact
aaggcaaaaagtgcagctgcttccatatttgctattcttgacaggaaatcactcatagat
ccaaatgatgaatcaggaatgacattggaagaagtcaagggtgaaattgagttaaagcat
gtcagtttcaagtatcctactagacccgatgttcaaatattcagagatcttagcttgact
attcacactggcaagacagttgcacttgttggagaaagtggaagcggaaaatcaacagtg
atctcgttaatacaaagattttatgatctagattcaggtcacattacacttgatggaaaa
gaaatccaaagtctacaagtgaaatggctaagacaacaaatgggtctagtaagccaagag
cctgttcttttcaatgatacaatcagagccaatattgcatatggaaaaggaggagatgca
tcagaagcagagattatagctgcagcagaattagcaaatgctcacaagtttattagtagt
ttgcaaaagggttatgatacaatagtaggagagagaggagttcaattatccgggggacag
aaacagcgtgtggcaattgcgagagctatagtgaagaatccaaaaatactattactagat
gaagcaactagtgcacttgatgctgagtctgagaaggtggttcaagatgcacttgatcgt
gttatggtggagcggacgacaataatagtagctcataggttatcaactattaagggtgca
gatttaattgcagtagttaagaatggtgttatagcagaaaaaggaaaacatgaagcattg
ctccataagggtggtgactatgcttctttagtagcattacacataagtgcttctacatct
tag
DBGET
integrated database retrieval system
