Trifolium pratense (red clover): 123907195
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Entry
123907195 CDS
T08949
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123907195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123907195
04147 Exosome [BR:
tpra04147
]
123907195
04090 CD molecules [BR:
tpra04090
]
123907195
Enzymes [BR:
tpra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123907195
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123907195
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123907195
CD molecules [BR:
tpra04090
]
Proteins
123907195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
ABC_ATPase
AAA_22
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_15
DUF87
SbcC_Walker_B
G-alpha
AAA_24
AAA_7
AAA_30
AAA_25
PRP9_N
Motif
Other DBs
NCBI-GeneID:
123907195
NCBI-ProteinID:
XP_045813313
LinkDB
All DBs
Position
LG2:complement(38621971..38627770)
Genome browser
AA seq
1278 aa
AA seq
DB search
MDIDSASIQPVVEDTGSKQEGSEENKAKDEKTNTVPLYKLFSFADPLDRLLMFVGTIGAI
GNGISMPLMTLIFGNMINAFGGSSSTKEVVDEVSKVSLKFVYLAAGTFVASLLQLTCWMI
TGERQAARIRGLYLQTILRQDVSFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFLQLI
ATFFGGFVVAFIKGWLLTVVMMSCIPLLVLSGAMMSMVITKASSSGQTAYSKAATVVEQT
IGSIRTVASFTGEKQAIAKYDQSLIDAYKTVVKEALASGLGFGSLYFVVIASYGLAVWFG
AKMIIEKGYTGGEVVTIIFAVLTGSMSLGQASPSLSAFAAGQAAAFKMFETIKRKPEIDA
YDTTGKKLDDIRGDIELREVCFSYPTRPDELIFNGFSLAIPSGTTVALVGQSGSGKSTVV
SLIERFYDPQAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATD
EEIRAAAELANAAKFIDKLPQGLNTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEA
TSALDAESERVVQEALDRIMVNRTTVIVAHRLSTIKNADTIAVIHQGKIIERGSHAHLTR
DPDGAYSQLIKLQEMKGSDQNVANDTNKSNNIVLSERRSSHRSLSSRSISQVSSGGGDSG
RHSFTASFGVPTTIVGVSETADGGTQAPPSPPEVPLYRLAYLNKPEIPVLLIGTIAAVLH
GVILPVFGLLLSKMISIFYESHDELRHDSKVWALVFVGFGVASLFIFPCRFYFFGIAGGK
LIKRIRKMCFEKVVHMEVSWFDESEHSSGAIGARLSTDAASIRALVGDALGLLVENISTA
IAGLVIAFVASWQLALVILALVPLLGLNGFLQVKFLKGFSNDSKKLYEEASQVANDAVGS
IRTIASFCSEEKVMDLYKKKCEGPIKTGIRRGIVSGFGFGISFFVLYAVYATSFYAGARL
VEDGKSTFSDVFRVFFALSMAAIGLSQSGSLVPDSTKAKSAAASIFAILDRKSLIDPNDE
SGMTLEEVKGEIELKHVSFKYPTRPDVQIFRDLSLTIHCGKTVALVGESGSGKSTVISLI
QRFYDPDSGHITLDGKEIQSLQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDASEAE
IIAAAELANAHKFISSLQKGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATS
ALDAESEKVVQDALDRVMVERTTIIVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLRKG
GDYASLVALHTSASSSTS
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggatatagattctgcaagtattcagccagtagtagaagatactggaagcaagcaagaa
ggttcagaggagaacaaagctaaggatgaaaaaaccaatacagtacctttatacaagctt
ttctcatttgccgatcctttggatcgtttattgatgtttgttgggactattggtgctatt
gggaatggaatctccatgcctttgatgactttaatatttggaaatatgatcaatgcattt
ggtggatcatcaagcaccaaagaagttgttgatgaagtttctaaggtgtccttgaaattc
gtatacttggctgcgggtacatttgttgcgtctcttttgcaattgacttgctggatgatc
actggtgagagacaggctgcaagaattagaggtttatacctacaaactattttgaggcaa
gatgtgagtttcttcgataaggaaactaatactggagaggttgttggaagaatgtccggt
gatactgttcttattcaagatgccatgggtgagaaggtgggacagtttctacagttaatc
gctacattctttggaggttttgttgtagcattcatcaagggatggcttttaaccgttgtc
atgatgtcttgtattccacttcttgtcttgtctggtgccatgatgagcatggttattaca
aaagcatcatccagtggacaaacagcttattctaaagcagcaactgtagtagagcagaca
attggttctatcagaactgttgcgtcgttcaccggagagaaacaagccatagctaaatat
gaccagtccttaatcgatgcttacaaaactgtagtgaaggaggccctagcttctggtttg
gggtttggttcactctactttgttgttattgctagttatggtttggcagtatggtttggt
gcaaaaatgataatagagaaaggttatacaggaggggaagttgtgactataatttttgct
gtattgactggatccatgtctctgggacaggcatctccaagcttgagtgcttttgctgca
ggacaagctgcagcatttaagatgttcgaaacgattaaaaggaagccggaaattgatgct
tacgacacaaccgggaaaaagcttgatgatattcgcggagacatagagcttagggaggtt
tgctttagttatcctacaaggccagatgaactgatattcaatggattctctcttgcaata
ccaagtgggactactgtagctttggtagggcaaagtgggagcggaaaatccacagttgtc
agtttgatagagagattttatgatccacaagctggtgaagttctcattgatggtatcaat
ctcaaagaatttcaacttaaatggatccgacagaaaatcggcctagtcagtcaggaaccg
gttctctttacttgcagcattaaagaaaatattgcctatggtaaggatggtgcaacggat
gaagaaatcagagctgcagcagaacttgctaatgccgccaaatttatagataaacttcct
cagggactaaacacaatggttggtgagcatggaactcagctctccggaggtcaaaagcaa
agagttgcaattgcaagagcaattctgaaagatccaagaatccttcttcttgatgaagct
acaagtgcacttgatgcggaatctgaaagagtagtacaagaggcattggacagaataatg
gtaaaccgaacaactgtcattgtagctcaccgcttaagtaccataaagaatgctgacacc
attgcggttattcatcaaggaaaaataattgaaagaggttcacatgctcatctcacaagg
gatcccgatggagcctatagccagctcattaagctgcaagaaatgaaggggtcagaccag
aatgttgcaaatgacacaaacaagtcaaacaatatagtgctatctgaaagaagatcgagt
catagatctttatcctcgagatctataagtcaagtgtcatctggaggtggagacagcggt
cgtcactcattcacagcgtcatttggtgtgccgaccacaatagttggcgtctcagaaacc
gcagatggtggaactcaagctcctccttcaccaccagaagtgccgctttatcgcctggcc
tatttaaacaagccagaaattcctgtcttacttatagggacaatagctgcagtgctgcat
ggtgtaatattaccggttttcggcctattgctttcgaaaatgataagtattttctacgag
tcacatgacgaacttcgtcacgattcaaaagtttgggcgttagtatttgttgggtttggt
gttgcgtcgttattcatttttccatgtagattctacttttttggcattgctggaggtaag
ttgatcaaaaggataagaaaaatgtgttttgagaaggtagttcacatggaagtaagttgg
tttgatgaatctgagcattcaagtggagcaattggagcaaggctctcaaccgatgcagct
tcgattcgagctttggttggtgatgcacttggtttactggttgaaaatatttctacagct
atagctggtttggtaattgcttttgtagctagctggcagcttgctcttgtaatccttgct
ttggtgcctctactaggacttaatggatttttgcaagtgaagttcttgaaagggttcagc
aatgattcaaagaaattgtatgaggaggcaagtcaagtggcgaacgatgcagtggggagt
ataagaacaattgcttctttctgttctgaagagaaggtgatggacctatataagaaaaaa
tgtgagggaccaattaagacaggcataaggcgagggatagtaagcggatttggttttggg
atatcattcttcgtgctgtatgcagtttatgcaaccagtttttatgctggagcacgtctc
gtcgaggatggaaaatctacattctcagacgtttttcgtgtattttttgccctaagcatg
gcagctataggactctctcaatccgggtcgttggtacctgattcgactaaggcaaaaagt
gcagctgcttccatatttgctattcttgataggaaatcactcatagatccaaatgatgaa
tcaggaatgacattggaagaagtcaagggtgaaattgagttaaagcatgtcagtttcaag
tatcctactagacccgatgttcaaatattcagagatcttagcttgactattcactgtggc
aagacagttgcacttgttggagaaagtggaagcggaaaatcaacagtgatctcgttaata
caaagattttatgatccagattcaggtcacattacacttgatggaaaagaaatccaaagt
ctacaagtgaaatggctaagacaacaaatgggtctagtaagccaagagcctgttcttttc
aatgataccatcagagccaatattgcatacggaaaaggaggagatgcatcggaagcagag
attatagctgcagcagaattagcaaatgcgcacaagtttataagtagtttgcaaaagggt
tatgatacgatagtaggagagagaggagttcaattatccgggggacagaaacagcgtgtg
gcaattgcaagagctatagtgaagaatccaaaaatactattactagatgaagcaactagt
gcacttgatgctgagtctgagaaggtggttcaagatgcacttgatcgtgttatggtggag
cggacgacaataatagtagctcataggttatcaactattaaaggtgcagatttaattgca
gtagttaagaatggtgttatagcagagaaaggaaaacatgaagcattgctccgtaagggt
ggggactatgcttctttagtagcattacatacaagtgcttctagttctacatcttag
DBGET
integrated database retrieval system
