Trifolium pratense (red clover): 123910850
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Entry
123910850 CDS
T08949
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123910850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpra02000
]
123910850
04147 Exosome [BR:
tpra04147
]
123910850
04090 CD molecules [BR:
tpra04090
]
123910850
Enzymes [BR:
tpra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123910850
Transporters [BR:
tpra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123910850
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123910850
CD molecules [BR:
tpra04090
]
Proteins
123910850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_29
AAA_21
RsgA_GTPase
ABC_ATPase
AAA_15
AAA_16
ATP-synt_ab
nSTAND1
DUF2243
Motif
Other DBs
NCBI-GeneID:
123910850
NCBI-ProteinID:
XP_045818087
LinkDB
All DBs
Position
LG2:complement(40539576..40545439)
Genome browser
AA seq
1255 aa
AA seq
DB search
MGSNSMFRYADGVDKLLMFFGTLGSLGDGLQNPLMMYILSDVINAYGDKNSRITQHDVNK
YASKLLCVAIGVGISAFIEGICWTRTAERQASRMRMEYLKSVLRQEVGFFDTQTAGSSTT
YQVVSLISSDANTVQSALSEKIPDCLTYISAFLFCHIFAFVLSWRLALAAIPLSVMFIVP
ALVFGKMMLDVTMKMIESYGVAGSIAEQAISSIRTVFSYVGENQTLKRFSTALQKTMELG
IKQGFAKGLMLGSMGVIYVSWGFQAWVGTFLISEKGEKGGHVFVAGFNILMGGLSILSAL
PNLTAIMEASAAVTRIFEMIDRVSTIDSEEKKGKALSHVRGEIEFKDIYFCYPSRPDSPV
LQEFNLTIRAGKRIGLVGGSGSGKSTIIALLERFYDPVEGEILLDGHKINKLQLKWLRSN
LGLVNQEPVLFATSIKENILFGKEGASMESVISAAKASNAHDFIVKLPDGYETQVGQFGF
QLSGGQKQRIAIARALLRDPKVLLLDEATSALDAQSERVVQEAIDQASKGRTTIIIAHRL
STIRTADTIAVLQAGRVIESGSHNELMEINGGQGGEYARMVELQQVTTQNDESKHSNIQT
EGKRSHRMNRSVPQSPGVSFKSSTPGTPMLYPFSQGFSIGTPYSYSIQYDHDDDDSFEDD
LKRPHHPAPSQWRLLKMNAPEWVRGVLGILGAIGSGAVQPVNAYCVGLLISIYFEPDTSK
MKSKARVLALVFLGIGVFNFFTSILQHYNFAVMGERLTKRIREKILEKLMSFEIGWFDHE
DNTSAAICARLASEANLVRSLVGDRMSLLAQAIFGSVFAYTAGLVLSWRLSIVMIAVQPL
VIGSFYARSVLMKTMAEKTRKAQREGSQLASEAVINHRTITAFSSQKRMLALFKSTMTGP
KQESIRQSWISGFGLFSSQFFNTGSTALAYWYGGKLLIQGLIEPTELFQAFLILLFTAYI
ISEAGSMTSDISKGSNAVGSVFAILDRKSEIDPETLWGSDKKRKIRGRVELKNVFFAYPS
RPEQMVFQGLNLKVEAGRTVALVGHSGCGKSTIIGLIERFYDPIKGMVCIDEQDIKTYNL
RMLRSHIALVSQEPTLFSGTIRENIAYGKENATESEIRRAATVANAHEFISGMNEGYETH
CGERGVQLSGGQKQRIALARAILKNPAILLLDEATSALDSASEVLVQEALEKIMVGRTCI
AVAHRLSTIQKSNSIAVIKNGKVVEQGSHNELISLGRNGAYYSLVKLQRGSSPPR
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggggagcaatagcatgtttcgttacgcagatggagtcgataaattgttgatgttcttt
ggaactctaggcagcctgggtgatggtctgcagaatcctcttatgatgtacattcttagt
gatgtgatcaatgcctatggcgacaagaatagccgtataacacagcatgatgtgaacaag
tatgcatccaagctattatgtgttgcaattggagttggaatttcagcttttattgaagga
atatgttggactagaacagctgagagacaggcttctagaatgagaatggaatacctaaaa
tcagtcttaagacaagaagttggtttctttgacactcaaactgctggttcttcaacaaca
taccaagttgtctccctcatttcctcagatgcaaatacagtccaatctgccttgtctgag
aagataccagattgcttgacttacatttcagcattcttattctgccacatctttgcattt
gtactctcatggagacttgcattggcagcaataccactctctgtcatgttcattgtcccg
gcacttgtattcgggaagatgatgttggatgtcacaatgaaaatgatagagtcttatggt
gttgctggtagtattgcagagcaagcaatatcttcaataagaactgttttctcttatgtt
ggagagaatcaaacactaaaaagatttagcactgcacttcaaaaaactatggagcttgga
ataaagcaaggttttgcaaaggggttgatgttaggaagtatgggagttatttatgtaagt
tggggttttcaagcttgggttggaacttttttgatatctgaaaaaggagagaaaggtggc
catgtatttgtagctggcttcaacatcctaatgggaggactgagcattttaagtgcactt
ccaaatttaactgccatcatggaagcctccgctgcggtcactcgcatttttgaaatgatt
gatagggtgtcaactatagattctgaagaaaagaaaggaaaggctttatcacatgtgaga
ggagaaattgaatttaaagacatatacttctgttatccatctaggccagattcaccagtt
ttgcaggaattcaatctcaccattcgagcaggcaagaggataggtcttgttgggggaagt
ggttctggaaaatcaacaataattgcacttcttgaaaggttttatgaccctgttgaagga
gaaatattattggatggtcacaagattaataaacttcaattgaaatggttaagatctaac
cttggcctagtgaatcaagagcctgttctttttgccacgtccataaaagagaatatatta
tttggaaaagaaggtgcttcaatggaaagtgtgataagtgcagctaaagcatcaaatgca
catgatttcattgtcaagttaccagatggttatgaaacacaagttggacagtttggattt
caattgtctggtggacagaaacagcgaatcgctatagctagagctttactaagggatcca
aaggttctccttcttgatgaagcaacaagtgcactggatgctcaatccgaaagagtggta
caagaagcaattgatcaagcttcaaaaggaagaacaacaatcatcattgctcatcgcctt
tctacaataagaacggctgacactattgctgtgcttcaagcagggagagtgattgaatca
ggtagtcataatgagctcatggaaataaacggtggacaaggcggagagtacgctcgtatg
gttgagttgcaacaagtaacaactcaaaatgatgaatccaaacattccaatattcaaaca
gaaggaaagagatctcataggatgaataggagcgttccacaaagtccaggagtaagtttc
aaatcaagcacaccaggcactccaatgttgtatcccttcagccagggattttccatcggt
acgccttactcatattccatccaatatgaccatgatgatgatgatagttttgaagatgat
ttaaaaagaccacaccatccagctccttcacagtggcgcttgctgaaaatgaatgcgcct
gagtgggtaagaggagtgttaggaatattgggagcaataggctcaggagcagtacaacca
gtaaatgcatactgtgttggattactcatatcaatttattttgaacctgatacctctaag
atgaagtctaaagctagagtcttggccctcgttttcttaggaattggtgtttttaacttc
ttcactagtattctccaacactacaattttgctgtcatgggagaaaggttaacgaaaaga
atacgagagaaaatactcgaaaaattgatgagttttgagataggatggtttgatcatgaa
gacaacacaagtgcagccatttgtgcgagattagcctccgaagcgaacttggttcgttcc
cttgtcggggacaggatgtctcttctggctcaagcgatttttggatctgtctttgcctac
actgcaggacttgttctctcatggaggctttctattgtgatgattgcagtacaaccatta
gtcattggaagcttttatgcaagaagtgttttgatgaagactatggcggagaaaactcgt
aaggcacaaagggaaggaagccaacttgcaagtgaagctgttataaaccatagaaccata
accgcatttagttcgcagaaaagaatgttggcactcttcaaatctacaatgacaggacct
aaacaggagagtattaggcagtcatggatttcaggctttggtcttttcagctcacagttt
ttcaacactggatcaactgcattagcatactggtatggtgggaagctcctgatacaagga
ctcatagaaccaacggaactctttcaagcatttttaatattactcttcactgcatacatc
atttcagaagctggaagcatgacttctgatatatctaaaggaagcaatgcagttggatca
gttttcgctatcctagacaggaaaagtgagattgatcctgaaaccttatggggatcagat
aaaaaaaggaaaattagaggcagggtggagcttaaaaatgtcttctttgcctatccaagt
agacccgagcaaatggtattccagggtctgaatctcaaagttgaggctggacgaacggta
gcacttgtggggcacagtggttgtggtaaatccactatcattggtctgattgaaaggttt
tatgatcctatcaagggaatggtttgcatagatgaacaagatatcaagacctataactta
agaatgttgaggtcgcatattgcattggtgagtcaggaaccaaccctttttagtggaacc
attcgagaaaatatcgcctatggaaaagaaaacgccactgaatctgagatacgaagggct
gcgactgttgctaatgctcatgaattcataagtggaatgaatgaagggtatgaaacacac
tgtggagaaagaggagttcagctatcaggaggacaaaaacaaagaatagcattagcaaga
gctatacttaagaatccagcaattcttcttttggatgaagctacaagtgcacttgatagt
gcatcagaggttttagtacaggaagcacttgagaaaataatggttggaagaacatgtata
gcagtggcacataggttatctacaatacagaaatcaaattccattgctgtgattaagaat
ggtaaagttgtggaacaaggttcacataatgaattgatttctcttggaagaaatggagct
tattattctcttgttaaacttcaacgtggtagctccccccctaggtga
DBGET
integrated database retrieval system
