Trifolium pratense (red clover): 123915183
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Entry
123915183 CDS
T08949
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123915183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpra03032
]
123915183
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123915183
Enzymes [BR:
tpra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123915183
DNA replication proteins [BR:
tpra03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
123915183
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
123915183
Bloom's syndrome complex (BTR)
123915183
FA (Fanconi anemia) pathway
123915183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
FH2
Motif
Other DBs
NCBI-GeneID:
123915183
NCBI-ProteinID:
XP_045822281
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All DBs
Position
LG3:44012298..44018189
Genome browser
AA seq
1008 aa
AA seq
DB search
MGFPYSFVKLKLLSSFDNCIHSNIAVDQIVEKYQSTCTPQPPVSKFPPVTPFADKVNFAG
QGDTFLPPELCLDCIHGYKLGLCPEAASHLQEFKDNLIAISNELIDNVENLSSVQIAKLR
EDRSQLNKQIQQLEKYIHSSNRDEERQKSHFATSMAPPTSFVYETPQRNVISSGPNRYDG
QAYMGNGTYEPSYQSSYVMPSGPVEREPFIPKIIEVNYIEGSGDKRWSSRDFSWTKELEV
NNKRVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALINPGITLVISPLV
SLIQDQIMHLLQANIPAAYLSANMEWAEQQDILRELNSAYCKYKLLYVTPEKVARSDVLL
RHLESLHVRELLSRIVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNTPVLALTATATASV
KEDVVQALGLVNCIVFRQSFNRPNLRYSVVPKTKKCLEDIDKFIRENHFDECGIIYCLSR
MDCEKVAEKLQECGHKCAFYHGSMDPDQRAFVQRQWSKDEINIICATVAFGMGINKPDVR
FVIHHSLPKSIEGYHQECGRAGRDGQSSSCVLYYSYSDYIRVKHMLSLGAIEQSPMPSGY
SRSNAINSGRILETNTENLLRMVSYCENDVDCRRYIQLVHFGEKFDSSTCQKTCDNCVKV
TSFVEKDVTEIAKQLVELVKLTGQKVSASHILEVYRGSLSQMVKKHRHETVRLHGAGKHL
AKGEASRILQHLVVEDFLVEEVKKSDFYGSVSSVLKVNETKVRNVLFGSQRIILRFVLPI
KFPSFVKASKPGKSDITPAKGSLTSGKLNLPIDIPDQPQTEVDVNLAANLYTALRMLRTA
LCREAGEGVMAYHIFGNATLQQISKRLPRTKEELLDINGISKTKVSKYGDRLLETIEKTI
NEFYNTDKNSSGSKGSADSAKRRREANRDPDSNAEDDDDSLIKSTGRSKKRTVRRQIKKA
EIYDSEEKDYYHGCLDEDLDCINIEDEALDKINGTDAAGRVLPRWTAS
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggggtttccctactcttttgtgaagttgaaactgttgagcagttttgacaattgtatt
cattctaacattgctgttgaccaaattgttgagaaataccagtccacttgcactcctcaa
cctccggtgtccaaatttcctcctgttacaccatttgcagataaggttaattttgccggg
cagggggatacttttttgccaccagagttgtgcttggattgcatccacggctacaagtta
gggctatgccctgaagcagcaagtcatttgcaggaatttaaggataatcttattgctatc
tctaatgaactgattgacaatgttgaaaatctcagttctgtgcagatagcaaagcttcgc
gaagacaggtcacagctgaataagcaaattcaacaacttgaaaaatatattcattccagt
aatcgtgacgaagagaggcaaaagtcacattttgctacatctatggcaccacctacatct
tttgtttatgaaacaccccaacgaaatgtcatcagtagtggaccaaatagatatgacgga
caggcttatatgggtaatggtacatatgagccatcataccagtcttcgtatgtcatgcca
tcaggtccagtggagagggaaccattcatcccaaagattattgaagttaattacattgaa
ggttctggagataaacggtggagcagccgggacttttcttggactaaagagttagaggtt
aataataagagagtatttggaaaccactcatttcgccccaaccaaagagaggtaattaat
gccacaatgagtggatgtgatgtttttgttttgatgcccaccggtggaggaaaaagtctg
acctatcagctaccagctctcattaatcctggtataacattagtgatttctccccttgtg
tcccttattcaagatcaaataatgcacctattgcaggcaaatatacccgctgcttactta
agtgccaatatggaatgggctgaacagcaggatatccttagagaactcaattctgcttat
tgtaaatacaagttgttatatgtgacacccgaaaaggttgccagaagtgacgttcttctg
cgacacttggagagtttacacgttcgtgagttgctttcaaggattgtaattgatgaagct
cactgtgtgagccaatgggggcatgattttagaccagattatcagggacttggtgtattg
aaacagaaattcccaaatactcccgttttagctttaacagctacagcaacagctagtgta
aaagaagatgttgtgcaagcactcggtcttgttaactgcattgtttttcggcaaagtttt
aatcgcccaaatttacggtattccgttgtccccaagaccaaaaagtgtttggaggatatt
gataaatttatcagggaaaatcattttgatgaatgtggcatcatctattgtctttcacga
atggactgtgaaaaggttgctgaaaaattacaggaatgcgggcataaatgtgcattttat
catgggagcatggatcctgatcaacgtgcttttgttcaaaggcaatggagcaaagatgag
atcaatataatttgtgctaccgtggcatttggaatggggattaacaaacctgatgtccgc
tttgtaatccatcattccctcccaaaatctattgaaggctatcatcaggaatgcggacga
gctggtagagatggtcagagttcctcctgtgtcttgtattatagctacagtgactatatc
cgagttaagcatatgttaagcctaggagcaatagagcaaagcccaatgccatctggatac
agtcgttcaaatgcgataaattcaggaaggatactggaaacaaacactgaaaaccttttg
cgcatggtcagttattgtgaaaatgatgtggactgtcggcgctatattcagctcgttcat
tttggggagaagtttgattcttcaacctgtcagaaaacatgtgataattgtgtgaaggtc
acaagtttcgttgagaaggatgtcaccgaaattgcaaaacaattggttgaactcgttaag
ctaacgggacagaaggtctcagcatctcatatattagaggtgtatcgtggttccttaagc
cagatggtcaagaaacaccgacatgagactgtgcgtcttcacggtgctgggaagcatcta
gctaagggtgaggcttcccgtatattgcaacatcttgttgttgaggattttcttgtggag
gaagtaaagaaaagtgatttttatggatccgtatcatctgtattgaaggtaaatgagaca
aaggtccgtaatgtgttatttggtagccaaagaattatattgaggtttgtccttcctatc
aaattcccgtcttttgtgaaagcatcaaagcctgggaaatctgatataactccagccaaa
ggttctctgacttccggaaagctgaatcttcccattgacattcctgaccaacctcaaact
gaagtagacgtgaacctagcagctaatttgtacactgctctgaggatgttgcggacagct
ctttgtagagaagctggagagggtgttatggcttaccacatatttggcaatgctacgttg
cagcagataagcaagagactaccaagaacaaaagaagaacttcttgatatcaatggcatt
agcaagactaaagtaagcaagtatggggatcggttactggaaacaattgagaaaaccata
aacgaattttacaatacggataaaaacagcagtggcagcaaaggcagtgctgattcagcc
aaaagaagacgagaggcaaatagagatccagattcaaatgcggaggatgatgatgattcc
ttaatcaaaagtaccggtcgttccaagaaaaggacagtaaggagacaaattaaaaaggct
gaaatatatgattcagaagagaaagattattaccatggatgccttgatgaggacctagat
tgtattaatattgaagatgaggcattagataaaataaatggtacagatgctgcaggaaga
gtactacctcgatggacagcatcttga
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