Trifolium pratense (red clover): 123920614 Help Entry 123920614         CDS       T08949                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism tpra  Trifolium pratense (red clover) Pathway tpra04120   Ubiquitin mediated proteolysis tpra04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:tpra00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     123920614  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     123920614  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:tpra04121]     123920614 Enzymes [BR:tpra01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      123920614 Ubiquitin system [BR:tpra04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     123920614   Multi subunit Ring-finger type E3    Cul4 complex     Target recognizing subunit (DCAF)      123920614 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 zf-C3HC4_2 zf-C3HC4 WD40_like ANAPC4_WD40 zf-C3HC4_3 zf-RING_2 zf-RING_UBOX zf-C3HC4_4 U-box zf-RING_5 DUF1664 YbfN zf-Nse Baculo_p24 Motif Other DBs NCBI-GeneID:  123920614 NCBI-ProteinID:  XP_045828860 LinkDB All DBs Position LG4:complement(22758805..22774738) Genome browser AA seq 676 aa AA seqDB search MEEHSLGPLVPAVVKPEPSKRHSTDTTTTTAVAGDTFPINTMSELDKDFLCPICMQIIKD AFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFLLDKLLKKTSDRQISKTAS PVEHFRQAIQKGCEVTMKELDTLLSLLSEKKRKMEQEEAERNMQILLDFLHCLRKQKVDE LKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRMLDDSGGRKSLYSSMDKNSSGLA SSPLNLRGGLSSGSHTKKNDGKSQISSHGIGIQRRDAISGSDSQYINQSGLALVRKKRVH TQFNDLQECYLQKRRQAADKPHGQQERDTNLISREGYSGGLDDFQSVLTTFTRYSRLRVI AEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMTT RSKLSCLSWNKYAKNQIASSDYEGIVTVWDVATRKSLMEYEEHEKRAWSVDFSRTDPSML VSGSDDCKVKVWCTNQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLRNIS RPVHVFSGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQNIPVRTFRGHANEKNFVGLT VSSEYIACGSETNEVFVYHKEISKPLTWHRFGSPDMDDGEDEAGSYFISAVCWKSDRPTI LTANSQGTIKVLVLAA NT seq 2031 nt NT seq  +upstreamnt  +downstreamnt atggaagaacactccttaggacctcttgtacctgcagtagtaaaacctgaaccatcaaaa cgccattccaccgacaccaccaccacaaccgccgtcgccggtgatacttttccgatcaac accatgtcggagctagataaagactttctctgtccgatttgtatgcagatcatcaaagac gcgttcctaactgcttgtggtcatagcttctgttacatgtgtatcattactcatcttcgt aacaaaagtgattgtccttgctgtggtcattacctcacgaatagtaacttgttccctaac ttcttgctcgataagctactaaaaaagacgtcggatcgtcaaatatcgaagactgcttct cctgtggagcatttccgccaggcgatacaaaagggttgtgaagtgacaatgaaggagctt gacacccttttgtcactcctttctgagaagaaaagaaaaatggaacaagaagaagctgag agaaatatgcaaatattgttagattttttgcattgtttacgcaagcaaaaagttgatgag ttgaaggaggtgcaaactgatctccagttcataaaggaggacattggtgctgtggagaaa catagaatggacttatatcgtgctcgggacaggtactctgtgaaattgcgaatgcttgat gattctggtggaagaaaatctttgtattcatcaatggacaagaacagcagtggccttgca tccagtcctttaaatcttcgaggagggttatcgtcaggaagccatactaagaaaaatgat ggaaagtcacaaatcagctctcacgggattggaatccagagaagagatgccattagtgga tcagactcacagtatataaatcaatcgggacttgctctagtcagaaagaagagggtgcat acacagttcaatgacctacaagaatgttatctacaaaagcgacggcaggctgcagataag ccacatggccaacaagaaagagatacaaatctcataagtcgagaaggttatagtggtggt cttgatgattttcagtcagtcttgacaactttcacacgctacagccgattgagagtcatt gcagaaataagacatggggatatatttcattcagccaacatcgtttcaagcatagagttt gaccgtgatgacgatttgtttgctactgctggagtttcccggcgaattaaagtttttgat ttttctgcggttgtgaatgaacctacagatgctcattgtcctgttgtcgagatgaccaca cgttcaaaacttagttgcttgagttggaacaaatatgctaagaatcaaatagctagtagt gattatgaaggaattgtgaccgtttgggacgtggccactcgaaagagtttaatggaatat gaagagcatgaaaagcgtgcatggagtgttgatttttccagaacagatccctctatgctt gtatctggtagtgatgattgtaaggtcaaagtttggtgcacaaatcaagaggccagtgtt ctaaatatagacatgaaagcaaacatatgttgtgtgaagtataatcctggatctgggaat tacattgcagttggatcagcagaccatcacattcattattatgatttgagaaatattagc cgaccggtccatgttttcagtgggcacaagaaggctgtttcatacgtgaaatttttgtcc aacgatgaacttgcatcggcatcaacagatagtacactgcgattatgggatgtgaagcaa aacataccagttcgtactttcagaggacacgcaaatgagaaaaactttgttggtcttaca gtaagcagtgaatacattgcatgtggcagtgaaacaaatgaagtatttgtctaccacaag gaaatctccaagcctttgacttggcatagatttggttcccctgacatggatgatggggag gatgaggctggatcttacttcatcagtgctgtatgctggaagagtgatcgccccaccata ctaactgcaaatagtcaaggcaccatcaaagtactggtgcttgctgcataa

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