Trifolium pratense (red clover): 123921192
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Entry
123921192 CDS
T08949
Name
(RefSeq) LOW QUALITY PROTEIN: chromosome transmission fidelity protein 18 homolog
KO
K11269
chromosome transmission fidelity protein 18
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpra03036
]
123921192
Chromosome and associated proteins [BR:
tpra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123921192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
RuvB_N
AAA_22
AAA_18
AAA_5
Rad17
NB-ARC
nSTAND3
AAA_33
AAA_14
AAA_assoc_2
AAA_16
AAA_25
AAA_17
ATPase
Gp44_lid
RsgA_GTPase
AAA_24
NTPase_1
TsaE
AAA_19
Motif
Other DBs
NCBI-GeneID:
123921192
NCBI-ProteinID:
XP_045829588
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All DBs
Position
LG1:complement(28838468..28859651)
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AA seq
965 aa
AA seq
DB search
MDDDYIMGMEEMDMDVPLPEELELLESTYRIYEQQDQEDHYFYQPPEDETEQQPPQDLAP
PSEPQSNSHKRSRSKSNSDSDLDDLDSSGVEKREKVRVRVEDPPVEEDWLRYSPPPTTTT
SVEEVRFSKEKTLSRFASEIDGEVMPVTAPNGDRVYTKLDRFYGEEQVTKLNCRGYSSDL
AVEXISVLFERLEQETFAKTLEASSVSQSVVDVPETLTVHEKLWVDKYAPKSFSDLLSDE
QTNREVLLWLKQWDSTVFGSEIRSTSDDVLSALKRHSSVSHKPKPTGSNFPRTNGGNNWS
SNRYTNSRSTAQSGNSTSIQDIRNTKSRNIGAPEQKVLLLCGPPGLGKTTLAHVAARHCG
YHVVEVNASDDRSTSTIEAKILDVVQMNSVLSDSKPKCLVVDEIDGALGDGKGAVEVLLK
MISAERKPDAGKQRLDNGQMERKSSKKGRKTASLSRPVICICNDLYAPALRSLRQVAKVH
IFVQPTVSRVVSRLKYICNKEGVKASAIALTALAEYTACDIRSCLNTLQFLSKKKETLNV
FHIASQVVGQKDMSKNVLDIWKELFQRKRTKKMERKSHNSKISEFDTLYSLISYRGDSDL
ILDGIHENILQLNYHDPVMQKTVKCLNSLEVYDLLHQYIMRTQQMPLLVHLPPIAIIVHH
TVAQVQKPNIEWPKSYHRYRTTMMEKMDILNTWHYKISPHIARHLSPTSFVEDLISPLLD
ILSPPTIKPVALQLLSDKEKNDIAQLVSTMVSYAITYKKMKSDALPNTLKYEVADELSLS
LVPSIGNFVNFKDYTSNHYVLSLAMKQVLVHEVEKHKILQANTKTATLANGGHEVNEAEN
NILANTKNHAAVVDMKTIQSQTNVLARKSNEYPKTVSPNMNPTKIAYATDNAKLLDMGNK
KKPSRSSLSFFDRFKKSSVKGLQNDDRSVQKETTSEKAQSPLLFKFNEGFTNAVKRPVRI
REFLS
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgactacatcatgggcatggaagaaatggacatggatgttcctctccccgaa
gaactcgaattactcgaatcaacttatcgaatctacgaacaacaagaccaagaagaccac
tacttttaccaaccacccgaagatgaaaccgaacaacaaccgccacaagatctcgctcct
ccttccgaacctcaatccaacagccacaaacgttctcgatcgaaatcgaattcggattcc
gatttggatgatttggattcttccggtgttgaaaaaagagagaaagttagggttagggtt
gaagatccaccggttgaagaggattggcttcgatactctcctcctcctactactactact
tcagttgaagaagtgagattctctaaggagaagacgttatcgcgatttgcgtcggagatt
gatggtgaagttatgccggttactgcgcctaatggagatagggtttatactaagcttgat
aggttctatggagaagagcaagtgacgaagctgaattgtagaggatattcttctgatctt
gctgtagaancaattagtgttctgtttgaaaggttggagcaagagacttttgctaagacc
ttggaagctagttctgtaagccaaagtgttgtagatgttcctgaaacactaacagtccat
gaaaaactttgggttgataaatatgctccaaagtcgttttctgatcttcttagtgatgaa
cagacaaatcgtgaggtactcttgtggttaaaacaatgggattctaccgtgtttggatct
gaaatacgaagtacatcagacgacgttttgtctgctttgaaacggcattcttcagtttcc
cataaaccgaaacctacgggttcaaattttccaagaacaaacggagggaacaattggagt
agtaacaggtatacaaattctagaagtacggcgcagagtggaaattcgacgagtattcag
gatatacgcaatacaaagtcacggaatattggcgcaccagaacagaaggtccttctgcta
tgtggaccaccaggtctcggaaaaacaacacttgcacatgtagctgctaggcattgtgga
tatcacgtggtagaggttaacgctagtgatgatcgttctacatcaacaattgaagcaaaa
atccttgatgtggttcagatgaactctgtcttgtctgattcaaagccaaagtgtctggtg
gtggatgaaattgatggagcccttggggatggaaagggtgctgtggaggttcttttaaag
atgatttctgctgaaaggaagcctgatgcagggaagcaacgtttggataacggacaaatg
gaaaggaaatcatcaaagaaggggcgaaaaactgcatccctgtcaagacctgtgatttgc
atatgcaatgacctatatgcacctgccttaagatcattacgccaagtggccaaggttcat
atatttgttcaaccaacagttagtcgggtggtaagcagactaaaatatatatgtaacaag
gagggggtgaaagccagtgccattgcactcactgctttagcagaatatacagcatgtgat
atacgctcatgcttgaacactctccaatttctctctaagaagaaagaaaccctcaatgtg
tttcatattgcttcgcaagttgttggtcagaaggacatgtcaaaaaatgttctggacatc
tggaaagagttgttccaaagaaaaagaacaaaaaagatggaaagaaaatctcataatagc
aaaatctctgaatttgataccttgtactcccttatatcataccgtggtgatagtgacctc
attctggatggaattcatgaaaatattctgcagctcaattatcatgatccagttatgcag
aaaactgtcaagtgcctcaacagtcttgaagtttatgatctgttgcatcaatatataatg
cgtacacaacaaatgcctctccttgttcatttgcctcccatagcaattattgtacatcat
acagtagctcaagttcagaagccaaacattgagtggccaaagtcatatcacaggtatcga
acaacgatgatggaaaagatggacattttgaatacttggcactacaaaatatctccacat
attgcaaggcacttatcacctacttcctttgttgaagacttaatttctccattgttggat
attctgtccccaccaaccataaaaccggtggcattacaactactatcggataaggagaag
aatgacattgctcaattagttagcacaatggtctcatatgctatcacatataagaaaatg
aaatcagatgcactgcctaataccctgaagtatgaagtagcagatgaattgtctttgtct
cttgttccttctatcggtaactttgtaaactttaaggattatacttctaaccattatgtg
ctctctttagctatgaagcaggttttagtgcatgaagttgaaaagcataagattttacaa
gctaatactaaaactgcaactttagcaaatggagggcatgaagttaatgaggctgaaaat
aacatattagccaataccaagaatcatgcagctgttgttgatatgaaaaccattcaaagt
caaactaatgttttagcaaggaaatcaaatgaatatcccaagacagtttcaccaaacatg
aatcccactaaaattgcatatgcaacagacaatgcgaaacttctagacatgggaaataag
aaaaaaccatctaggagttccttaagtttctttgacaggtttaaaaagtcaagtgttaag
ggactccaaaacgatgacagatctgtacagaaagaaactacatcagagaaagctcaaagc
cctttactttttaaatttaatgagggttttacaaatgcagtcaaaaggcctgttcgaatt
cgtgaatttctgtcctag
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