Trichogramma pretiosum: 106653419
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Entry
106653419 CDS
T07644
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106653419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106653419
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106653419
mRNA degradation factors
5'-3' decay
Decapping complex
106653419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
106653419
NCBI-ProteinID:
XP_014228335
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MDHDSELIREQPMADFFFEFDTSLGAGVDDQSDCFLDDEDLGEDYDALNDETFGSEATGG
DWEQAHEKLAQITESNRTKNKKGPKKSEPEIDVASTLSHLVLDEREVTIPKPGVWDSPHF
ALAPPQIQKPLAALKNACTVEELERDLITNRPPPGLTKPISSQSQTQQAPASGANLFLGS
LSSMNKYPPQTNGGVGSPINQFPSMNNAGLQNLAMPPPQFHQQNARHMPNQPGNMMRYPP
MPPPHIMMNQGNQRPPHNNFPMNNFPHPPPNHRPGPMPFMGPDRMHMPLYHNNMIPHPMQ
HNMHMANQRNQNNHQPFFRDNRFPQQNQNRFFPNQSHPMLHMNHHMNNHHNMHNNVNQYG
EYDEYAGLMNNREKQWLNNIQLLQLNTNQPYIDDYYYTVFCDRLNKKNEIKKLNMNNKKS
SNGKSSNSSNNNNGFNRDSRDKEQNTTFTKNPNTPMQFENSLGKLQYSSVTAPRKIIDMD
VVPNSDPQSALSIQQKDTKKTRQLLLEIERLYMMVLKLEDKSNPLAIIAEQQREQQMRER
AQLQALETGKPVPPPEHRDILKEKEELIVQILESLLRLVQDDKFSSFLCIRKGKTLFLRF
LACVDVKEQELKLVKLWGAVIKGLAIIGRRDSNLLINLYPEFHKWVDENCISFAMLMNLA
KEFIESSSQTASKTNSLAFAFTNKLGISMLSLMIKHAEELSSYEASIPGIFTDLWSRFLK
CISQNIPASPTVTPCESIDVELLKTHLRRHGAEKYLDSFELHFSDSNAAR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgacagtgagctcattcgtgaacaaccaatggcagattttttcttcgagttc
gacaccagcctcggggctggtgtagatgatcaatcggattgtttcttagacgacgaggat
ttaggagaggactatgatgccttgaacgatgaaacttttggatctgaggcaacgggcgga
gattgggagcaggcccacgaaaaactcgcccagatcacagagtctaatagaacaaaaaat
aagaagggacctaaaaagagtgaacccgagatcgatgtagcaagtacattgtctcactta
gttctggatgagagggaagttaccattccaaagcctggagtttgggatagtcctcatttt
gcattagcacctccacaaattcaaaagccattagctgctttaaaaaatgcatgcacagtg
gaagaattggagagagacctcattaccaacagaccaccaccaggtctcactaagcctata
tcatcccaatcacaaacgcaacaagcacctgcatctggagctaacctatttcttggttcc
ttatcatcaatgaataaatatccaccacaaactaatggaggagttggttcgccaatcaat
caatttccatccatgaacaatgcaggacttcaaaatcttgcaatgccaccacctcagttt
caccaacaaaatgctcgtcacatgccaaatcaaccaggcaatatgatgaggtatcctcct
atgccaccacctcacatcatgatgaaccaaggtaatcaaagaccgccccacaacaacttt
ccaatgaacaattttcctcatccacctccaaaccataggcctggaccaatgccattcatg
ggaccagatcgtatgcacatgccactctatcataacaacatgatacctcatcctatgcaa
cacaatatgcacatggccaaccagcgcaatcaaaacaaccatcaacctttctttagagac
aatagatttccacaacaaaatcaaaataggttctttcccaatcaaagccatccaatgctc
catatgaatcatcatatgaataatcatcataacatgcacaacaatgtcaatcagtatggt
gaatatgatgaatatgccgggttaatgaataacagggagaaacagtggttgaataacata
caattgttgcaactcaatacaaatcagccctacattgatgattattactacactgtgttt
tgtgatagattaaacaagaaaaatgaaattaaaaaacttaatatgaacaacaaaaaatct
agcaatggtaaaagctctaacagcagcaataacaacaatggtttcaatagagattcaagg
gacaaggaacaaaacacaacttttacaaagaatccaaatactccaatgcaatttgaaaat
tcattgggtaagttgcagtatagtagtgtcacagcaccaaggaaaattatcgacatggat
gtcgttccaaacagtgaccctcaatcggcgctttcgattcagcagaaagatactaaaaaa
actcgtcagttactgttggaaattgaaaggctatatatgatggttttaaaactcgaagac
aaaagtaatcccttggctataattgctgagcagcagcgtgagcaacagatgagggagcga
gctcagttgcaagctctagaaaccggaaaaccagtgcccccacctgagcatcgtgatatt
ctgaaagaaaaggaagaattaattgtacaaatattagaatcacttttgcggctagtgcaa
gacgataaattttctagttttttgtgtattcgtaagggcaaaacactctttttgcgcttc
ctcgcgtgtgtagatgtcaaagagcaagaattgaaactagtaaaattgtggggtgctgtt
atcaaaggcttagctattatcggtagaagggattcaaacttactaataaacctctatcct
gaatttcacaagtgggtcgatgaaaattgcataagttttgcaatgcttatgaacctagca
aaggagttcatcgagtcatctagccagacagctagcaagaccaatagccttgcgttcgct
ttcaccaacaagcttggcatatcaatgctgtcgctcatgataaagcatgccgaggagctg
tcttcttacgaagcgtcgattccaggcatattcaccgatctgtggtccagattcttgaag
tgcatctcccagaatatacctgcctcgccgacggtcacgccatgcgagtccattgacgtc
gagctacttaaaacgcacttgcgccgacacggagccgaaaagtatctggacagtttcgag
ctacacttcagtgactcgaacgctgctcgataa
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