KEGG   Trichogramma pretiosum: 106654303
Entry
106654303         CDS       T07644                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tpre  Trichogramma pretiosum
Pathway
tpre03030  DNA replication
tpre03410  Base excision repair
tpre03420  Nucleotide excision repair
tpre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tpre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106654303
   03410 Base excision repair
    106654303
   03420 Nucleotide excision repair
    106654303
   03430 Mismatch repair
    106654303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpre03032]
    106654303
   03400 DNA repair and recombination proteins [BR:tpre03400]
    106654303
Enzymes [BR:tpre01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     106654303
    6.5.1.6  DNA ligase (ATP or NAD+)
     106654303
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     106654303
DNA replication proteins [BR:tpre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    106654303
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     106654303
DNA repair and recombination proteins [BR:tpre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     106654303
   NER (nucleotide excision repair)
    Other NER factors
     106654303
   MMR (mismatch excision repair)
    Other MMR factors
     106654303
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme DUF3153
Other DBs
NCBI-GeneID: 106654303
NCBI-ProteinID: XP_014229586
LinkDB
Position
Unknown
AA seq 1110 aa
MSQRSITSFFGKKDGSKVENKNGDSDVKKAKEKAMEKVEAVGGKRKRDKSSEAIKSPKAA
KKSSTNDDRKSKDGKRKSSEDKSPPAQVAKKSKLNESNGKVNGKKDSDKGKNKKDSKDEV
TSKKSKLNDSSSKKKNKKEDEKKKEKSKKLDDSTLSNEDEEEDEEIEDVDSDDDDSSEPA
SEDSEEEVAPTRVLRSARRAESKAAVTAKKLSSLVDDDTSSDEESKPSASGSNKVSNIID
DDDDESDDEDFDPIKEKEKVLKKKLEGSSSSLSAEEASDAESDEPSQMEVDEDESSIEEE
KEQKKEKVTKGKATPASKKLKAFAREEKSPAKDEKENEEPKDNDVKTKEDKSAKEDKKET
DDSAEEKSEASSNEDDKVQSKTEVDSKESKGESNSEENNSEVNGKSPEKNDNCGKESNKH
NQDDEIKKMKSPSPKKVNPFASLGKGKQNKTNDSANYDPSSSSYHPINSAFWKAGEKVPY
LALTKTFELIEGISARLKIIEILSNYFRSVITLSPDDFLASIYLCLNQLAPAYEGLELGI
AETNLMKAIASSTGRTLAQIKAEMQKVGDLGIIAEGSRSNQKMMFQPPPLTINTVYTKLK
EIASTSGQSSGLKKVDKIQSLFVACRHSEARYLIRSLAGKLRIGLAEQSVLQAIALACAM
TPPEQKRPFEKLNASKGISSESFKAKYDELALILKTTYCQCPNYNKIIPVLLEKGIKELP
NECKLTPGIPLRPMLAHPTKNIQEVLSRFDGLKFTCEFKYDGERAQIHIDENGAVKIFSR
NQEDNTSKYPDIISRVPNTKGEEVTSCVLDCEAVAWDKEKKQILPFQVLSTRKRKDANEA
EIKVQVCVFIFDLLYFNGTALVQEPFQKRREMLRKHFKTVEGEWYFAESLDTQSIEEVQE
FLDVSIKGNCEGLMIKTLEKEATYEIAKRSRNWLKLKKDYLDGVGDTLDLVVIGGYIGKG
KRTGTYGGFLLACYDQENEEYQSICKIGTGFSEDDLAKHTEALKELVTEKPKPYFRYDSS
LEPDHWFEPKLVWEVKCADMSISPVHMAAKSIVDPEKGISLRFPRFIRIREDKNSEDATS
SQQIADMYLSQEQIKNQNTTSSGVAEEDFY
NT seq 3333 nt   +upstreamnt  +downstreamnt
atgtcgcagagaagtatcacgtcgtttttcggcaaaaaggacggctccaaagtcgaaaat
aaaaatggtgatagcgatgtgaagaaagccaaggaaaaggcgatggaaaaagtggaggca
gtcggtggaaagcgcaagcgagacaagagcagcgaggcgatcaagtcgccgaaagccgcc
aagaagtcctcgacgaatgatgacagaaagtccaaggatggaaagcgtaagagttccgag
gacaaatctccaccggctcaggttgctaaaaaatccaaactcaatgagtccaatggcaaa
gttaacggcaaaaaagacagcgacaagggcaagaacaagaaagattccaaggacgaggtg
actagcaaaaaatccaagttgaatgattccagtagcaaaaagaaaaacaaaaaagaggat
gagaagaagaaggaaaaaagcaaaaaattggatgattccaccttgagcaacgaagatgaa
gaagaggatgaggagattgaagatgtcgacagtgatgatgatgattcatcagaacctgcc
tctgaggacagcgaagaagaagttgcacctactcgagtactgaggagtgcacgcagagct
gaaagcaaagcggctgtcactgctaaaaagctaagtagtcttgttgatgatgatacttct
tcggatgaagaatctaaaccatctgcttctggttccaataaagtcagtaatattattgat
gatgacgacgatgagtctgacgatgaagactttgatccaatcaaggaaaaagagaaggtg
ctcaagaaaaaacttgaaggttctagctcatctctttctgctgaagaagcttctgatgca
gaatctgatgagcccagccaaatggaggtagatgaagatgaaagtagcattgaggaggaa
aaagaacagaaaaaagaaaaagtaaccaagggtaaagctacacctgcaagtaaaaaatta
aaagcttttgcacgtgaagaaaaatcgcctgccaaggatgaaaaagaaaatgaagaacca
aaggataacgatgtcaaaaccaaggaagataaatcagcaaaggaggacaaaaaggaaact
gatgatagtgcagaagaaaagtcagaggctagcagcaatgaagatgacaaggtccagtcc
aagacagaagttgattctaaagaatcaaaaggtgaaagtaattcagaagaaaataattct
gaagtaaatggtaagtctccagagaaaaatgataactgtggtaaggaatcaaataaacat
aatcaagatgatgaaattaaaaagatgaaatctccatcccctaagaaagtcaatccattt
gctagtttaggtaaaggaaaacaaaataaaacaaacgactcggcgaactacgatccttca
tcatcatcatatcatcccataaacagtgctttctggaaagcaggagagaaagtaccatat
ctagctttaactaaaacatttgaacttatcgagggtatcagtgctcgattgaaaatcata
gaaattctttcaaattactttcgttctgttataactttgagtcctgatgattttcttgca
agcatttacttgtgcttgaatcaattggctcctgcttatgaaggcttggaacttggaatt
gcagaaactaatctaatgaaagctatagcaagctcaactggtagaacacttgctcaaatt
aaagccgaaatgcagaaagttggagatctaggcataattgctgaaggaagtcgttcaaac
cagaaaatgatgtttcaacctccacctcttactatcaatacagtttatactaaattgaaa
gaaatagcctccacttctggacaatcttctgggttaaaaaaagttgacaaaatccagtca
ttattcgtggcttgtcgtcattcagaagctagatatctcatcagatcattggctggtaaa
ctcaggataggtcttgctgaacaatctgttttgcaagcaatagctttggcctgtgccatg
acaccaccagaacaaaaaagaccttttgaaaaacttaatgcttcaaaaggcatatcttca
gaatcatttaaagctaaatatgatgaactagcactgattttaaaaacaacttattgtcag
tgtccaaattataacaaaatcattccagttcttcttgagaaaggcatcaaggaattacca
aatgaatgcaagctcacaccaggtattccattgagacctatgcttgctcatccaactaaa
aatattcaagaagtattgagccgctttgatggactcaaattcacgtgtgaatttaaatac
gacggtgaacgagctcaaattcatattgatgaaaatggtgcagtaaaaatatttagcaga
aatcaagaagataatacaagtaaatatcctgatattatcagtcgtgttcctaacaccaaa
ggagaagaagtgacaagctgcgttttggattgtgaagctgtagcctgggacaaggaaaag
aagcaaattttacctttccaagttcttagcactagaaagcgcaaagatgcaaatgaagct
gaaatcaaagtacaagtttgcgtttttatatttgatttattatatttcaatggcacagcc
ttggttcaagaaccattccaaaagcgacgtgaaatgctcagaaaacacttcaagaccgtt
gaaggagaatggtatttcgccgagagtctcgacacgcaatcaatcgaagaagtacaagag
ttcctggacgtatccatcaaaggaaactgcgaaggtctcatgatcaaaacattagaaaaa
gaagcaacatacgaaatagcaaaacgttcgcgcaattggctcaagctcaaaaaagattat
ctcgacggcgtcggcgatacattggatctcgttgtaattggaggctacatcggcaaaggc
aagcgtactggtacttacggcggttttctcctggcttgctatgaccaggaaaatgaagag
tatcaaagcatatgtaaaattggtactggtttctccgaagatgatttggctaaacatact
gaagctctcaaagagctggtcaccgagaaacccaaaccgtatttccgttacgactccagt
cttgaaccagaccattggttcgagccaaaactcgtctgggaagttaaatgtgccgatatg
tcaatttcgccagtacacatggctgcaaagagtatcgtcgatccggaaaaaggaatatcc
cttaggttcccgagattcattaggataagagaagacaaaaattccgaagatgctacgtcg
tcccaacaaatagctgacatgtatctgagtcaggaacaaattaagaatcagaacacaaca
tcttctggcgttgcagaagaagacttctattaa

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