Trichogramma pretiosum: 106657642
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Entry
106657642 CDS
T07644
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03013
Nucleocytoplasmic transport
tpre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106657642
03015 mRNA surveillance pathway
106657642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpre03019
]
106657642
Messenger RNA biogenesis [BR:
tpre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106657642
mRNA cycle factors
P-body specific factors
106657642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
KN_motif
Motif
Other DBs
NCBI-GeneID:
106657642
NCBI-ProteinID:
XP_014234738
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MTKDEVKEKFASHEVENERRSVSDASSEPVKHRDKKDKQNKPMTKVVIRKLPPSMTEEEF
KEQISPIAENDYFSYEKPDKTLGHTYQFCRAYINFINPQDVFDFKDKFDDYVFVDSRGVE
YPAVVEFAPSQKIPKYRVLQKNKDVVSQIGTIELDLDYINYVENLQSQNIQNEKPAKKAE
YSYQVPSVESKNKIITPLVGYVRQMNLEKQMKKEDKKRRDIERKKVDLERKKETEKMHST
DTNNYRTILVQDSLAQNSLQKDETKKNTESKHEKEKTYQKDTKGKSKKEDRPNKSNKDKD
VKNTSKQQKIREDRAKKTEVPKEQNEPTERKTEEKRGKSYLRMRQEKMKLAEKKNANEST
SKAAEKITADEKKTTDVESSSISSEEQTKKILKRPNVQDKNLETTDDSACNKIKQSMSDS
DKDEKAIENASHRISKRRSSLESGGDSCSSLKSSSSGNAKDNNSEDRLRRHKSLDGSNKG
NLQKTEVEGDGDKEKKDPRLERRIRNKDRPAMEIYRPGMGKFSKQRIEREKGEERVTPSQ
SPTPTSSSSSSGFKSNRSNSVEVRSMTFKRSVHRE
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggacgaggtgaaagaaaaatttgcctcccacgaggtcgaaaatgagaggcgt
tctgtcagtgatgctagttcggaaccagtgaaacatagagataaaaaggataaacagaat
aagccaatgacaaaagttgttataaggaaacttccaccatcgatgacagaagaagaattt
aaagaacagatatcacccattgcagaaaatgattatttctcttacgaaaaacctgataaa
actttgggtcacacatatcagttttgtagggcgtacatcaatttcatcaatccacaagat
gtttttgacttcaaagataagtttgacgattatgtatttgtggattcaagaggcgtcgag
tatcctgcagttgtagaatttgctccaagtcaaaaaataccaaagtaccgtgtattgcaa
aaaaataaagatgttgtttcacagataggtacaatagagctagatctggattatataaat
tatgtggagaacttgcaaagtcaaaatattcaaaatgaaaaacctgcaaaaaaagcagaa
tactcgtatcaagttcctagtgtggagtccaaaaataaaatcatcactcctcttgtggga
tatgttaggcaaatgaatcttgaaaaacaaatgaaaaaagaagacaaaaaaagacgagat
attgaacgcaaaaaagttgatctagaacgtaaaaaggaaacagaaaaaatgcactctaca
gacacaaataattatcgtacaatattagttcaagattcattagcccaaaattctttgcaa
aaggatgaaacgaaaaagaatacagaatctaaacatgaaaaggaaaaaacttatcaaaaa
gacaccaaaggtaaatcgaaaaaagaagataggccaaataaaagtaacaaagacaaagat
gttaaaaacacgtcaaaacaacaaaaaattcgagaggacagagcaaaaaaaactgaggta
cccaaagaacaaaatgaacctactgaacggaaaacagaagaaaaacgtggtaaaagctac
ttgagaatgaggcaagaaaaaatgaagttggctgaaaaaaagaacgcaaatgaatctact
tcaaaagctgcggaaaaaattacggcggatgaaaagaaaacaactgatgtggaaagctcg
agtatttcaagtgaggagcagacaaaaaaaattctgaagcgaccaaatgttcaggataaa
aatttggaaacaacagatgattctgcctgcaataaaataaaacaatctatgagcgatagt
gataaagacgaaaaagcaatagaaaatgctagtcatagaatatctaagaggcgtagttca
ctggaaagtggtggagattcatgttcgagccttaaatctagtagtagtggcaatgcaaaa
gataataactcagaagataggttgagaaggcacaaatcactggacggttctaacaaagga
aatttacaaaaaacagaagtcgaaggggatggagataaagagaagaaagatccgcgttta
gaacgacgaattcgcaataaagatcgtccagctatggaaatatatcgtcccggcatgggt
aaatttagcaaacagcgcatagagcgggaaaaaggtgaagaacgagtgacgccgtcacag
agtccaactcccacgtcgtcgagctcctctagcggcttcaaatcgaatagatctaacagc
gtcgaagttcgctcgatgactttcaaaaggagtgtacatcgagagtga
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