KEGG   Trichogramma pretiosum: 106658556
Entry
106658556         CDS       T07644                                 
Name
(RefSeq) histone deacetylase Rpd3
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tpre  Trichogramma pretiosum
Pathway
tpre03082  ATP-dependent chromatin remodeling
tpre03083  Polycomb repressive complex
tpre04213  Longevity regulating pathway - multiple species
tpre04330  Notch signaling pathway
tpre04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tpre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106658556
   03083 Polycomb repressive complex
    106658556
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    106658556
   04350 TGF-beta signaling pathway
    106658556
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    106658556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tpre03036]
    106658556
Enzymes [BR:tpre01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106658556
Chromosome and associated proteins [BR:tpre03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     106658556
   HDAC complexes
    Sin3A-HDAC complex
     106658556
    BRAF-HDAC complex
     106658556
    REST complex
     106658556
    SHIP complex
     106658556
    MiDAC complex
     106658556
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     106658556
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106658556
  Chromatin remodeling factors
   NuRD complex
    106658556
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 106658556
NCBI-ProteinID: XP_023315629
LinkDB
Position
Unknown
AA seq 493 aa
MSQMQHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDSYESI
FVPIITKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKSRLFENLRMLPHAPGVQVQAIPEDGANVEDIEAEEKINPDERLPQRDIDKRIQHENE
FSDSEDEGDGGRRDSRSYKGVRKRPRLDKNSENPDAEVKKEDESKPDVKTEIEKDEKTNT
NNDENKKDGMSSA
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgtcgcaaatgcagcatagtcgcaaacgagtctgttactactacgacagtgacatcgga
aattattactatgggcaaggtcatcccatgaaaccgcatcgcataaggatgacccacaat
ttacttttaaattacggactttacagaaaaatggagatatatcgtcctcacaaagccaca
gctgatgaaatgactaaatttcatagtgatgagtacatcagatttttgaggtcaataaga
ccagataatatgacagagtacaacaagcaaatgcaaagattcaatgttggggaagattgt
cctgtttttgatggtttatatgagttttgtcagttatctgctggtggatcagtagctgca
gcagttaaattgaataaacaagcttctgagatatgtatcaactggggtggaggtcttcat
catgctaaaaagagcgaagcctctggattttgctatgttaatgacatagtattaggaatt
ttggaactccttaagtatcatcaacgtgttttatatatagatattgatgtacatcatgga
gatggagttgaagaggcattctatacaactgatcgagtaatgacagtctctttccacaag
tatggagagtacttccctggcactggcgatttacgtgatattggtgctggtaaaggaaag
tactatgcagttaacattcctctcagagatggaatggacgatgatagctatgaatcaatt
tttgtaccgattattacaaaagtcatggaaactttccaaccatctgctgttgttctccaa
tgtggagctgattctttgacaggtgatcgattaggttgctttaatttaactgtcaaaggc
catggtaaatgtgttgaatttgtaaaaaaatacaacttacctttcctcatggttggaggt
ggtggttataccatcagaaatgtatcaagatgctggacatatgaaacttccgtggcttta
ggttcagaaattgctaatgagcttccgtataatgactattttgaatattttggtcctgac
ttcaagttacacattagtccatcaaacatggctaatcaaaatactcctgaatatttggaa
aaaataaaatcaagattgtttgaaaatcttaggatgttaccacatgcacctggagtacaa
gtgcaagctattccagaagatggagcaaatgtagaagatattgaagctgaagaaaaaatc
aatcctgatgaaagacttccacaacgtgacatagacaaaagaatacagcatgaaaatgaa
ttcagtgacagtgaagatgaaggcgatggtgggagaagagatagtcgatcttataagggt
gttagaaaacgaccaaggttagacaaaaattcagaaaatcctgatgctgaagtaaaaaaa
gaagatgaatctaaaccagacgttaaaacagaaattgaaaaagatgaaaagacgaataca
aacaacgatgaaaacaaaaaagatggtatgagcagtgcttga

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