Trichogramma pretiosum: 106658556
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Entry
106658556 CDS
T07644
Name
(RefSeq) histone deacetylase Rpd3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03082
ATP-dependent chromatin remodeling
tpre03083
Polycomb repressive complex
tpre04213
Longevity regulating pathway - multiple species
tpre04330
Notch signaling pathway
tpre04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106658556
03083 Polycomb repressive complex
106658556
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
106658556
04350 TGF-beta signaling pathway
106658556
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
106658556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpre03036
]
106658556
Enzymes [BR:
tpre01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
106658556
Chromosome and associated proteins [BR:
tpre03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
106658556
HDAC complexes
Sin3A-HDAC complex
106658556
BRAF-HDAC complex
106658556
REST complex
106658556
SHIP complex
106658556
MiDAC complex
106658556
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
106658556
Heterochromatin formation proteins
Other heterochromatin formation proteins
106658556
Chromatin remodeling factors
NuRD complex
106658556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
106658556
NCBI-ProteinID:
XP_023315629
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MSQMQHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
ADEMTKFHSDEYIRFLRSIRPDNMTEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDSYESI
FVPIITKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGG
GGYTIRNVSRCWTYETSVALGSEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKSRLFENLRMLPHAPGVQVQAIPEDGANVEDIEAEEKINPDERLPQRDIDKRIQHENE
FSDSEDEGDGGRRDSRSYKGVRKRPRLDKNSENPDAEVKKEDESKPDVKTEIEKDEKTNT
NNDENKKDGMSSA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaatgcagcatagtcgcaaacgagtctgttactactacgacagtgacatcgga
aattattactatgggcaaggtcatcccatgaaaccgcatcgcataaggatgacccacaat
ttacttttaaattacggactttacagaaaaatggagatatatcgtcctcacaaagccaca
gctgatgaaatgactaaatttcatagtgatgagtacatcagatttttgaggtcaataaga
ccagataatatgacagagtacaacaagcaaatgcaaagattcaatgttggggaagattgt
cctgtttttgatggtttatatgagttttgtcagttatctgctggtggatcagtagctgca
gcagttaaattgaataaacaagcttctgagatatgtatcaactggggtggaggtcttcat
catgctaaaaagagcgaagcctctggattttgctatgttaatgacatagtattaggaatt
ttggaactccttaagtatcatcaacgtgttttatatatagatattgatgtacatcatgga
gatggagttgaagaggcattctatacaactgatcgagtaatgacagtctctttccacaag
tatggagagtacttccctggcactggcgatttacgtgatattggtgctggtaaaggaaag
tactatgcagttaacattcctctcagagatggaatggacgatgatagctatgaatcaatt
tttgtaccgattattacaaaagtcatggaaactttccaaccatctgctgttgttctccaa
tgtggagctgattctttgacaggtgatcgattaggttgctttaatttaactgtcaaaggc
catggtaaatgtgttgaatttgtaaaaaaatacaacttacctttcctcatggttggaggt
ggtggttataccatcagaaatgtatcaagatgctggacatatgaaacttccgtggcttta
ggttcagaaattgctaatgagcttccgtataatgactattttgaatattttggtcctgac
ttcaagttacacattagtccatcaaacatggctaatcaaaatactcctgaatatttggaa
aaaataaaatcaagattgtttgaaaatcttaggatgttaccacatgcacctggagtacaa
gtgcaagctattccagaagatggagcaaatgtagaagatattgaagctgaagaaaaaatc
aatcctgatgaaagacttccacaacgtgacatagacaaaagaatacagcatgaaaatgaa
ttcagtgacagtgaagatgaaggcgatggtgggagaagagatagtcgatcttataagggt
gttagaaaacgaccaaggttagacaaaaattcagaaaatcctgatgctgaagtaaaaaaa
gaagatgaatctaaaccagacgttaaaacagaaattgaaaaagatgaaaagacgaataca
aacaacgatgaaaacaaaaaagatggtatgagcagtgcttga
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integrated database retrieval system