Thalassiosira pseudonana: THAPSDRAFT_11641
Help
Entry
THAPSDRAFT_11641 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M4
Peptidase_M48
Motif
Other DBs
NCBI-GeneID:
7443645
NCBI-ProteinID:
XP_002294656
JGI:
11641
UniProt:
B8CF47
LinkDB
All DBs
Position
20:741498..746629
Genome browser
AA seq
1460 aa
AA seq
DB search
MTNTSLFILSLLLQLHHHASHAFIDPNEQAELQDEPSTASFFTNSDPLATKEITTEITLK
NELYSLADLVHLQQQQSNSGFNGAKEDTISLLEDAITTLSLLTSLSSTSTTGVDNVQIDA
RSGHVASLIMSTPLLPGRGVGNGLLWSVDGGGVDNDEDGNSYLDGSGIILDDVGMLIDED
ANNINTNNSDGRDEAPTTNEQWEQFAHQAIQHWITDHQYELQIDPKELFDSSDGYHNFVS
GSVKVDGSDTSSSSSTNTASYSSNNNNNNNVEMAIHSNGELIQLILPRKHRSLPVINSQA
TASIHHGNLVHFGVENWGDIELDVRPSLSVENVWKVLVDHVGTGMSDGIDGVGGIGRMED
VEFWCKPELFVLVRTKDGRVFASAAEEEDGRVEGSNDVFMNFDDRDRQRKRRGLGSSLTS
DTVNHDADKATTSTSNNTQYGKGYTHHLIYKLCPRFSPAQKYEAHIDAHTGQIYSFTNKI
HFLNIEGSVYPTSNDGLEPDGVIQHDYPMLYMDVTVEQHGSGKRRKYVTDHGGGVPLVSD
GTVRMELAGPYVSMNDMCGKSELVGSGVSASLDWGSSEGSDCSTPSVGGQGNTHSSRSGF
YELNMIKAMARSHLPSNKWLEKQLVANVNFESSCNAFWDGETVNFYRGSGQCRNTGEITA
VVDHEWAHGLDENDVVKTISEPSGEGIADIYAALRLNDSCIGRGFYIERKCLTIDDKCLE
CTGVREIDYHKMRSNQPHTLSWSREKCGHSVHCLGLVYSEAIWSLYKEKLSKYYGYDSNT
SLEIVTRLTYVAAGHVSTWYSDNGGCDSGSGYLNYLIADDDDGDLQNGTPHMMAIYEAFD
EQEIACATPKVQDSGCIGSSLMDSPIVTAVPGSKEISLSWNKILGAVAYEVFRTEGSKGC
DMGKIKLTETTSTSFKDEGLRDGREYFYIIIPKGSSGSCFGPSSQCITVSPVAPPGVQIT
CPSDAAVINLLNESPRGTIECAIEAVGGFDGNVEVECTSLNGTICNSAQTSLSFTSQLTQ
QFVSFNVEVVSSAKVEGRGEASVVLSYGDVKIAHPFQLWFIEYGQASEAQYDQEYFAPRC
TAAGRYCSSETLLEGRGKRLGPELNTPNSFNNTCVDGNQGTYKVDESIEKIIVRSGDIHE
MAGRDMKEGDAVTIEATVFSYGTGAADTADFFYAKDASNPEWIWIKSIKPTQGGLNTLKA
SYILPGNSTNQAVRVNYRYNGLLSTCSGGPYDEADDLIFAVLSKNPPPPTSKTMNAPSGR
PSASPSSSAVSNSPIFEDNANELQATANATFDSSLGAPSCLTTSSSCDTGTLVDGRGRTG
LNGKERNGSNSLDQCKDGRRGVYHKHGSIDRILVKTMDGDSFKEGSQIWIEATVYAKRKH
EYKADFYYTNDAASPNWIYIGEKSASSKNGLKVLTMAHTLFLPGTMQAVRVNLRQGERND
EVSCSTGSKDDVDDVAFAVI
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacacatcgctcttcattctatcactgctcctccaactacaccatcatgcatca
catgccttcatcgatccaaacgaacaagcagagctacaagatgaaccctccactgcttcc
ttctttaccaatagcgatccactggcaaccaaggagattacgacagagattactctgaag
aatgagctgtattcgttggctgatcttgtccatctccaacagcagcaaagcaactccggc
ttcaacggtgcaaaagaggatacaatctcacttctggaagatgcaatcacaactctctcg
ctgctgacatctctatcatctacatccactaccggagtagacaatgtacagatcgatgca
cgatcgggacatgtagcttccttgatcatgagcactcctctcttgccggggaggggggtt
ggtaatggactgttgtggagtgtggatggtggaggagttgacaacgatgaggatgggaat
agctatttggatggaagtggtatcatcttggatgatgttggtatgctcattgatgaggat
gcaaataatatcaacacgaacaatagcgatggaagagatgaagcaccgactaccaatgaa
caatgggagcaattcgcacatcaggccattcaacattggatcaccgatcatcagtacgaa
ttacagatcgatccgaaagagttgtttgatagcagtgacggctatcataactttgtctct
ggcagtgtgaaagtcgatggcagtgatacatcatcatcaagcagtacaaacacggcaagc
tacagcagcaacaacaacaacaacaacaacgttgaaatggcaattcactcgaacggagaa
ctaatccaactcatcctcccccgcaaacatcgttcgcttccagtcattaactctcaggct
actgcctccatccatcatggcaacttggtacactttggagttgaaaactggggagacatt
gagttggatgtacggcctagtttgagtgtggagaatgtttggaaagtgttggtagatcat
gttggtactggcatgagcgatgggattgatggtgtgggagggattgggaggatggaggat
gtggagttttggtgtaagcctgagttgtttgtgttggttcggactaaagacggtagggtg
tttgcctcggctgctgaagaagaggatggaagagtggaagggagcaatgatgtctttatg
aactttgatgacagagatcgtcaaaggaaacgacgaggtttgggctcttctcttacctcc
gatacagtcaaccacgatgcggacaaagcaacaacatccacatccaacaacacacagtac
ggtaaaggatacactcatcacctcatctacaaactctgtccacgattctcaccagcgcaa
aagtacgaagcacacattgacgctcacaccggtcaaatctactctttcacaaacaagatt
catttcctcaacattgaaggaagcgtctatcctacttctaacgatgggttggagcccgac
ggagtcattcaacatgattacccaatgctctatatggacgtgacggtagagcaacatggt
tccggcaagaggagaaagtacgtgacggatcatggagggggtgtgccattggtgagtgat
ggaacggtgaggatggagttggccgggccgtatgtgagtatgaatgatatgtgtggaaag
agcgagttggttgggagtggtgtgagtgctagtctggattggggatcgtcagagggaagc
gattgctctacaccgtcagttggaggtcaaggcaacactcattcctctcgtagcggcttc
tacgagctgaacatgatcaaagccatggcaaggagccacctaccttccaataagtggctt
gagaagcagttggtggcaaatgtgaacttcgagtcttcttgtaatgccttttgggatgga
gaaacagtcaacttctaccgtggatcaggacaatgccgaaacactggtgaaatcaccgca
gtcgtagatcacgaatgggctcatggacttgacgaaaacgacgtagtcaaaacaatctcc
gaaccctctggcgagggaattgcggatatttatgcagctcttcggctgaatgatagctgc
attggcagaggtttctacattgaacgaaaatgcttgacgattgacgacaagtgtcttgaa
tgcacaggtgtacgggaaatagattatcataagatgaggagcaaccagccgcacaccttg
agttggtctagagaaaaatgtggacactccgttcattgcctcggtcttgtatattcggaa
gcaatctggtctctctacaaagagaagctcagcaaatactacggatatgatagcaacaca
tcacttgagattgtgactaggttgacatacgtcgctgctggacatgtttctacgtggtat
agtgacaatggtggatgcgacagtgggtctggttatctcaactacctcatcgccgatgac
gacgatggagatctacaaaacgggacgccgcacatgatggcaatatatgaggcttttgat
gaacaagagatagcttgtgctactccaaaagtgcaagactcgggatgcatagggagctca
ctgatggattcacctatagttacggcagtccctggttcaaaggagatttcattgtcgtgg
aacaagatattaggtgctgtggcgtatgaggtctttcggactgaaggttccaaagggtgt
gatatgggtaaaatcaagttaacggaaacaacgtcgacttctttcaaggatgaaggtctt
agagacggccgcgagtatttctacataattattccaaaaggctcaagtggatcatgcttt
ggcccttcatcacagtgcatcacagtgtctccagtagccccaccgggagttcaaatcaca
tgcccttccgatgctgccgtcataaatctgctgaatgaatctcctcgtgggacgatcgag
tgtgctattgaagcagttgggggttttgatggaaatgtggaagtggaatgtacttcgtta
aacggcacaatatgcaattcggctcaaacgtcattgtcgttcaccagccagttaacacaa
cagtttgtctccttcaacgtcgaagttgtttcaagtgcaaaagttgaaggcagaggggag
gcttcggtggttctgtcttacggagacgtcaagatagcgcacccgtttcaactctggttc
attgaatatggtcaagcgagtgaagctcagtacgatcaagagtactttgctccaagatgc
actgctgccggtcgctattgctcttctgaaaccttacttgagggaagaggaaagaggctg
ggaccagaactcaatactcccaattcattcaacaacacgtgcgtcgacggaaatcaaggg
acgtacaaagttgacgaatctatcgaaaagataattgttcgctcgggtgatattcatgaa
atggcaggaagagatatgaaagaaggagatgcagtcactattgaagctacagtcttttcg
tatggtactggagctgcagatacagctgatttcttctatgccaaagatgcatcaaatcct
gaatggatatggattaagtcgataaagccaacgcaaggaggcctcaacactttaaaggct
tcatatattctacctggtaactcaacaaaccaggcggtgagggtaaattacaggtacaac
ggtctcctcagtacatgcagcggtggcccatacgacgaagcagatgacttgatctttgca
gtactgtccaagaaccctcctccacctacttctaaaacaatgaatgctccatcgggtcga
ccttcagcctctccttcctcatctgcagtttctaatagtccaattttcgaggataatgcc
aatgagcttcaagctacagcaaatgcaacgtttgattcatcattaggtgctcccagttgc
ttaacaacctcgtcatcgtgtgatacgggtacgcttgtggacggtagaggaagaacggga
ttaaacggcaaagagaggaatggatctaattcgctcgatcaatgcaaagatggtagacgt
ggagtttaccacaagcatggatctatagacagaatattagtcaagacgatggatggcgat
tctttcaaggagggaagccagatctggatcgaggcaacagtttatgccaaaaggaaacat
gaatataaggctgacttctattacaccaacgatgcagcaagcccgaattggatatatatc
ggtgagaagtctgcttcctcgaagaatggtttgaaggtactgacgatggcacacacgctt
ttcttacctgggacaatgcaagctgtccgagtcaacttgaggcaaggagagaggaacgat
gaagtttcgtgttcaactggaagcaaagacgatgttgacgacgtggcatttgcggttata
tga
DBGET
integrated database retrieval system
