KEGG   Thalassiosira pseudonana: THAPSDRAFT_21026
Entry
THAPSDRAFT_21026  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K12825  splicing factor 3A subunit 1
Organism
tps  Thalassiosira pseudonana
Pathway
tps03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    THAPSDRAFT_21026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tps03041]
    THAPSDRAFT_21026
Spliceosome [BR:tps03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    THAPSDRAFT_21026
 Complex B
    THAPSDRAFT_21026
 Complex C
   U2 SnRNP specific factors
    THAPSDRAFT_21026
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin BUD22
Other DBs
NCBI-GeneID: 7447606
NCBI-ProteinID: XP_002287016
JGI: 21026
UniProt: B8BS45
LinkDB
Position
1:complement(2584953..2587456)
AA seq 764 aa
MAPISGIIRPPPDIRAVADRTALFVSKNGRAFEHKILNSEKGKTPKFAFLHDASPFHAYY
ENRIRFYEEGGTDEEEKRKEEEEKKRRALEEEERAAKLKEEADAAAAAAKKKETKMKASA
VDPVARALLACRSKISDARTARSAAAAAAADATSKEAEDESAENQIKEPEATGPQPPPTL
RFVSLAAPANLTPLEVEVIKLTAQYVALSDKGSGPAKRDNFLSNLTLREWTNPEFMFLQP
RHAHFAYFTALVDGYRSFLPGGEEYERMQNKMKMDAKKERLAHLISDDNGGADAKQVAKS
ENTVKDCLEAAAYRTEYERDAAIRRREAAERDGGGGILGGAGFIDWHDFVVVETIEFAVD
EVVEALPPPTSLRLAALNNEQPEKDEAKIVEETKVEEEDDEMEESSSEEEDMGDDDDDDD
DDGGEKLKVVSNYQPKVVSTKEITGDASRTHIIDPITGKSIAIADMPEHMRIQLLDPKWQ
EEKKRFLEKQRETNFVAGDDIASNINRFAQARGDIFGASQAELQNQKNDSERRLMEANEL
IRAQAMQQPQPQPVGVVGVGVPPPPLAAMVPPPPPPPPPPPQMAQQSVSAEEPAAKRPKL
DDAAQPTIPPSNVTVASTVSIPMTFGAVPVPVPPLFDPNVMAAPVPPPPPPVPQQQETLP
EAEFIATLENPAEVAFCVRIPYDASNAGWNFNGQTIDLSPGATTTVKEVKAMLKEQLGGM
PINKMQLKHPDSGFMNKDGLTLAHFNVGPGMTLDLVPKTRGGRK
NT seq 2295 nt   +upstreamnt  +downstreamnt
atggcacccatctccggcatcatccgccccccacccgacatacgcgcagtcgccgaccgc
acggccctcttcgtctccaaaaacggacgagccttcgaacacaaaatcctcaacagcgaa
aagggcaagactcccaagtttgcctttttgcacgatgcctcgccctttcatgcgtattat
gaaaatcgtattcggttttatgaagagggaggcaccgatgaagaggagaagaggaaggag
gaggaagagaagaagagaagggctttggaggaggaggaacgggcggccaagttgaaggag
gaagcggacgctgcggctgccgcggcgaagaagaaggagaccaagatgaaggcatcggct
gtagatcctgtggcgagggctttgttggcttgtcgttccaagatatcggatgctcgtacg
gcgaggagtgctgcagcagcagcagcagctgatgctacatccaaagaggcagaggatgag
agtgccgagaatcaaatcaaggagccagaggctaccggtcctcaaccgcctcccacactt
cgatttgtgtcacttgctgctcctgcaaatctaacccccctcgaggtggaagtgatcaaa
ctaaccgctcaatacgttgccctgtccgataagggaagtggaccagccaagcgagacaac
ttcctcagcaacctaacgctacgagaatggacgaatccagaattcatgttcttgcaaccc
cgccacgctcactttgcctactttacggccttggtggatggatatcgtagtttcttgccg
ggtggggaggaatacgagaggatgcagaataagatgaagatggatgccaagaaggaacgg
ttggctcatttgatttcagatgataatggtggagccgatgcgaagcaagttgccaagtcg
gaaaacactgttaaggattgtcttgaggcagcagcctatcgtaccgaatacgaacgtgat
gcagccatccgcagaagagaagcggcagaacgtgatggaggtgggggaatacttggtgga
gcagggttcattgactggcatgatttcgttgtggtggaaacgattgagttcgccgtggat
gaagttgtggaggcgttgccaccaccgacttcgttgcgtttggctgcattgaacaatgag
cagcctgaaaaagatgaggcaaagattgtggaggaaaccaaggtggaggaagaagatgac
gagatggaggagtcttcatccgaggaggaagatatgggagacgacgatgacgacgacgac
gacgacggtggagaaaagcttaaggtggtatcaaactatcaacccaaagttgtatccacc
aaggaaatcaccggagacgcatcgcgcactcacattatcgatccaattaccgggaaatca
atcgccattgccgacatgcctgaacacatgcgtatccaactcttggatcccaaatggcaa
gaggagaagaaacgctttcttgaaaagcagcgtgagacgaactttgtggccggagatgac
attgcatcaaatatcaatcggtttgctcaggcccgtggggacatattcggtgcgtcgcag
gcagagttgcagaatcaaaaaaatgattcggaaaggaggttgatggaagcgaatgaactg
attcgtgcacaggcgatgcagcaacctcaaccgcagcccgtcggggttgttggggttgga
gtgcctccgcctccactagctgctatggtacctcctcctcctccaccaccaccaccacca
ccccaaatggcacaacaatctgtatcagcggaggaacctgcagcaaagagaccaaagctt
gacgatgcggctcagccaacgattccaccatcaaatgtgacggttgcttcaacggtgtcc
attccaatgactttcggggcagtcccagtacctgtgccacctcttttcgatcctaatgta
atggcagcacctgtaccgcctccgccgccgcctgtgccacagcagcaggagactcttccg
gaagcagagttcatcgctacattggagaatccagcagaagtagcgttttgtgtccgtatt
ccatatgatgcatcaaatgcaggctggaatttcaatgggcaaacgattgatctctctcct
ggagccacgacaacggtaaaggaagtaaaggcgatgctcaaagagcaattgggtggcatg
ccaatcaacaaaatgcaattgaaacatcctgattctgggtttatgaacaaggatggactg
acgttggctcatttcaatgttggacctggcatgacgctggatctcgtgccaaagactcgt
ggtggtagaaagtaa

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