Thalassiosira pseudonana: THAPSDRAFT_22589
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Entry
THAPSDRAFT_22589 CDS
T01078
Name
(RefSeq) predicted protein
KO
K20347
p24 family protein beta-1
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_22589
Membrane trafficking [BR:
tps04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
p24 family proteins
THAPSDRAFT_22589
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMP24_GP25L
Proteasome_A_N
Proteasome
DUF3978
Motif
Other DBs
NCBI-GeneID:
7449675
NCBI-ProteinID:
XP_002290556
JGI:
22589
UniProt:
B8C202
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Position
5:complement(388945..391388)
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AA seq
616 aa
AA seq
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MNQFSLRLLFIALLQLFNVIDLVDGAYSVKVESGNEECFVVKAPANVESTISGNFDCLDD
EISPNPIGVILYDSKMTPVWKSQPKASEGTFSIPGSGRHELCIQNGSNGNDDFVAAKDGI
DREVGFAIRVLPPQRGLDGEAGPDDRLTSHLIEMSDKLMEGLHTMADHQEYMRGRENRHS
VLADTTFNRIVQWTVLEAVVLILISFGQVLYLKKFFETKRHLRELAHCRLSSRSPPAPVI
MVKLSVASLLLLSLLYQSYAARSISAKKVRNPNTPRAADRYDRSITTFTPEGRLLQLEYS
LIAAEERGRGLTVCVEWEGVVIFAFPSSDYDNTDGWSFVNEGDGALPHTSDDTSYAKDIC
DESEAESSSAKSTILSSIHSKTLFLESITKQNQSHNTKVHRLSPTHLLLTSGLAGDSRTL
ASAFRRMISSWTHINYGEVVTAREVAKEVGKVRHGIGLRPGARVLGVVGMVIGLEDTDDF
NEEHTQQQELGVEVRMYRSLPGGTIDRCNVCCTGGGADAAGCLARKEAMETLQKLVSATE
SDGENDNEQSNELHGEGNETSDKEVELQRIIEEVGRVSLKYHPDAREEDDVVAKDKGHKR
LKLLRQELLTTKGICL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagttctcactgcggctcctctttattgcactcttgcaactcttcaatgttatc
gatctcgttgatggtgcctattctgtgaaggtggaaagtggaaacgaagagtgcttcgtt
gtaaaagctccggcgaatgtggagtcaacgattagtggaaactttgactgtctcgacgat
gaaatatcaccaaatccaataggtgttattctctatgacagcaagatgacaccagtctgg
aaatcacaaccaaaagcatccgaggggacattttcgatcccgggatctgggagacacgag
ctttgtatccaaaatggcagtaatggaaatgacgatttcgttgctgcgaaggatggaatc
gatcgggaagtcggttttgcaattcgtgtactgccaccacaacgggggttagatggggag
gccggtccagatgacagattaacttctcacttgattgaaatgagtgacaaattgatggag
ggattgcatactatggcagatcatcaggagtacatgcgagggagagagaatagacactcg
gtattggcggatacaacgtttaatcgtattgttcagtggactgtgctggaggcagtggtt
cttatcttgatatcttttggacaagtgctgtatctgaagaagttctttgagacgaagagg
catttacgggaactagcacactgtcgcctttcctcacgctccccccctgcccctgtcatc
atggtgaagctctccgtagcatcccttcttctcctatctctactttaccaatcctacgca
gcgagatccatatctgcaaagaaggtccgcaatccgaacacaccacgagcagcagatcgg
tacgaccgtagcatcaccaccttcacacccgaaggacgccttttgcaattggagtactcg
ttgattgctgcagaagaacgaggcaggggtttgactgtttgtgtggagtgggaaggggtt
gttatctttgcttttccttcgagtgattacgataatactgatggttggagcttcgtaaat
gaaggcgacggtgcattaccacatacatcagatgacacttcttatgccaaagatatctgc
gatgagagcgaagcagagtcttcatctgctaaatcaactatcttgtcgtcaatacactcg
aaaacactgtttcttgaatcaatcaccaagcagaaccaatcacacaacacaaaagtacac
agactgtcaccaacccatctccttctaacatccggccttgcaggtgattcaaggactctt
gcatcagcttttcgtagaatgatttcatcatggacgcatatcaactacggggaggtagtt
actgcccgtgaggtggctaaggaggttggaaaagtacgccatggcattggattacgtccg
ggtgctagagtgttgggggtagtgggcatggtgattgggttagaagatacggatgacttc
aatgaagaacatactcaacaacaagagttaggggtagaggttagaatgtatcgaagtctt
cctggaggaacgatagataggtgcaatgtgtgctgcactggaggaggtgctgatgctgca
ggatgtttggcgagaaaggaagcgatggagacactgcaaaagcttgtttctgcaactgaa
agtgatggagaaaatgataatgaacaaagcaacgaacttcatggtgaaggtaacgaaaca
agtgacaaggaagtggagttacaaagaatcattgaagaagtaggacgggtgtccttaaag
taccacccggatgctagagaggaggatgacgtggttgccaaagataagggccataaaaga
ttaaagctgctccggcaagaactgttgacaacgaagggtatatgtttgtaa
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