Thalassiosira pseudonana: THAPSDRAFT_23894
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Entry
THAPSDRAFT_23894 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PT
Motif
Other DBs
NCBI-GeneID:
7444972
NCBI-ProteinID:
XP_002291919
JGI:
23894
UniProt:
B8C7M9
LinkDB
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Position
8:1253524..1265579
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AA seq
1524 aa
AA seq
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MALSADHGAAIAPAPSTQPSVQPSEGPSVSGMPSEDPSSEPSKEPSSEPSSNPSESPSSI
PSTQPSSDPSSNPSEQPSSNPSSIPSESPSISLKPSVMPSDSPSISGKPSAAPSSLPSVG
PSESPSSEPSSIPSSNPSEKPSSIPSSSPSSIPSKEPSSDPSRSPSSEVDGWFLILTSPF
FISSPLNPKALEHTIHSTEQQRMSIFAGLHFQLSLIVLPHQLSNTSPSQLFILKPSSLPS
ESPSVSHQPSDVPSDSPSASAKPSEGPSESPSVSAKPSVSTQPSVSSIPSISIVPTDSSK
PSAQPSKEPSSNPSSIPSSAPSNVPSSGPSEQPSSLPSSGPSEQPSSIPSSNPSEKPSSN
PSESPSSIPSTQPSSDPSSNPSEQPSSIPSTSPSSRPSTNPSESPSLSAKPSVMPSDSPS
SSGAPSESPSSIPSTQPSSAPSSNPSSIPSKEPSSIPSSAPSEQPSSIPSKEPSGSPSSI
PSTQPSSNPSSIPSDTPSSMPSDSPSISSQPSISTQPSVSSLPSISIQPTDSAQPSSLPS
STPSDIPSTIPSSAPSSEPSSLPRSFEQPSNVPSRTPSSEPSSLPSGSPSSIPSTDPSSL
PSESPSSIPSSLPSNVPSLSPSESPSSIPSRDPSSVPSSIPSTSPSSEPSSNPSESPSSI
PSTQPSSEPSTNPSESPSSIPSSQPSSEPSSNPSESPSSIPSKESLTHEIILYNPLLQQP
SSIPSTNPSSQPSSIPSKEPSSVPSSAPSEQPSSIPSKEPSSIPSSAPSEQPSSIPSSAP
SDVPSSMPSDSPSISTQPSISTQPSVSSHPSISVVPSMSAQPSSLPSTMPSDVPSSQPSS
IPSTQPSSIPSSSPSSEPSSIPSAQPSSIPSSSPSSEPSSIPSAQPSSIPSSSPSSEPSS
IPSSQPSSIPSSSPSETPSSQPSSMPSSEPSSAPSETPSSQPSSMPSESPSSQPSSMPSE
TPSSQPSSEPSESPSSQPSSMPSETPSSQPSSEPSSQPSSMPSESPSSQPSSEPSSQPSS
MPSETPSSQPSSQPSSTPSETPSSQPSSQPSSQPSETPSSQPSSQPSESPSSQPSESPSS
QPSAQPSESPSSQPSESPSESPSASPSETPSSNPSRSCENLRTDCGWGIFNPWTCQCDCP
VGICLDGNQQCYLTCTETINTNPFAGCAPGWDCPWFPDSSAGHCKSEMHLSQQYEIYRTA
SECCEAHFKGSSTCLDDSRASHVPYPWPIYQVRGDSPPPGKDSKWYPDLSNKINCVYGKR
YEEWMAADGYDTYYLFPSSTKCCDMWYPQRSDCPDTSGEVSSEVEDEAWYMDPYPMNNYY
FPDFTASNCGFGRDYPAWMGENGFEKWYLFTRGNECCTRYFPTASNCPMENTVQTGYYWE
SYQANQANDAVLPIVYNHTFYPDLNANTCINGTDYPSWMESDEVYIRLYLYKAVGDCCTF
WFGQGALTDCANSVIQGEYIDYNATSSPSYNATAELLDMWYPHLDDKTCLKDGETPTWMT
QNGFEKWYLFNTREACCAAFGCTF
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggctctctcggcagaccacggagcagccattgcacccgcaccgtcaacccagccaagt
gttcaaccgagcgagggccctagtgtgagcggcatgcctagtgaggatcctagtagtgag
ccttcgaaggaaccaagcagtgagccaagctccaatccgtcggaatctcccagctccatt
ccctccactcaacctagcagtgatccctcgtccaatcccagtgaacaaccttcctccaac
ccaagcagcataccctccgaatcaccctccatctcgctcaaacccagtgtaatgccatcg
gattctccttccatatctggaaagcctagcgctgctcctagttctttaccgagcgtgggt
ccttcggagagtccttcgtccgagccctcaagtatcccgtcttccaacccgagcgagaag
ccctcgtccatcccgagctcttctccaagctccattccctcaaaagaaccgagctctgat
ccatcccgttctccatcgtctgaggttgacggttggttcttgattctcacctcgcctttc
ttcatctcttctccattgaacccaaaagccctcgagcataccatccactcaaccgagcag
caacgtatgtctatcttcgccggcctgcattttcaattgtcactgatcgtgttaccgcat
caattatctaacacctctccttctcaacttttcatattaaagccttcatcgcttccatca
gagtcaccatcagtatctcatcaaccaagtgatgtacccagtgactctccttcagcttcg
gctaaacccagcgagggcccaagcgagtctccttcggtatcggcaaaaccaagcgtcagt
actcagccgagtgtatcgtccattccatccatctccattgtgcccaccgactcaagcaag
cctagtgctcaaccgagtaaggagccatcatcaaacccctcgagtattcccagctctgca
ccctccaacgtgccatcctcgggaccctcggaacaaccaagcagtcttccttcgagcgga
ccctctgagcagccatcaagcattccgtcttcaaacccaagcgagaagccaagctccaat
ccgtcggaatctcccagctccattccctccactcaacctagcagtgatccctcgtccaat
cccagtgaacaaccgagctccattccatctacttctccgtcgtctcggccgtcgaccaat
ccctctgagagtcctagcttgagcgcaaagccaagtgtgatgccttccgactccccgtcg
tcttctggtgcacccagcgaatctccaagcagtatcccatcgactcaaccttcgtctgct
ccttcttcaaacccctcgagcattccctcgaaagagccaagcagtattcccagctctgca
ccatcggaacagccatcaagcatcccctcgaaggaacctagtggatcgcccagttccatt
ccttctactcagccatcgtccaacccatccagtatacccagcgacactccaagcagtatg
ccttcggactctccatctatttcttctcaacccagtatcagtactcagccgagtgtatcg
tctcttccatccatttcaattcagcctacagactcggctcaacccagttcactcccgtca
tccaccccgtcagacattccaagcacgataccctcgtctgctccgtcttcggagccaagc
agcttgccacgctcctttgaacagccatcaaacgttccctcccgtaccccgagctcagaa
ccttcatcgcttccttccggctctcccagctcgatcccttcaacagacccgtcgtcgctt
ccttcggaatctccttcaagcatacctagttcgctgccttccaatgtgccatcactgtcg
ccttcggaatctcccagttccataccttctcgcgatccaagcagcgtgccctcgagcatt
ccctccacatctccgagcagtgagccatcttcaaatccctcagaatctcctagctccatc
ccttcaacccagccgagcagcgagccctctacaaatccctccgaatctcctagttccatc
ccttcatctcagccaagcagtgagccatcgtccaatccctccgaatctcccagctcgatc
ccttcaaaggaatctctcacccacgaaatcatcctttacaatcctctccttcaacagcca
agctccatcccatccaccaacccatcgtctcagccatcgagcatcccttcgaaggaacca
agcagtgttcccagttcagcaccctcggaacagccatcgagcattccctcgaaggaacca
agcagtattcccagttcagcaccctcggaacagccctcatccatcccgtcttcagcaccc
agcgacgtcccaagcagcatgccttcagactctccatctatttctactcagcccagtatc
agtactcagccgagtgtatcgtcccatccatccatatcagttgttccttcaatgtcagcc
caacccagctcacttccatcaacgatgccctcggacgttcccagtagtcagccctctagc
atcccatcaacccaacccagttcaatccctagtagctctccatcatccgagccgtcaagc
atcccatcagctcaacctagctcgatcccgtcttcttctccttcgtccgagccctcgagc
atcccatcagctcaacccagttcaattccgagcagttctccttcgtctgagccctcgtcg
atcccgtcgagccaaccaagctctatcccgagttcttctccctccgagacgcccagctct
cagccgagcagcatgccgtcgtcagaaccgtcgtcagctcccagcgagacgcccagtagt
caaccatcctcaatgccctctgaaagcccaagcagtcaaccatcttcaatgccttccgag
actcccagtagtcagccctcgtcggaaccctctgaaagcccaagcagtcaaccatcttca
atgccttccgagactcccagtagtcagccctcgtcggaaccatcaagccaacccagctcc
atgccgagcgagtcgccttcgtctcagccctcttctgaaccatctagccaacctagtagc
atgccttccgaaacgcccagcagtcagccatcatcgcaacccagtagcacgccttcggaa
acgccaagcagtcagccgtccagccaacccagttctcagccgtctgaaactccctcctct
cagccatcgagccaaccctcagagtcaccatcaagccaaccgtcagagagtccttcttcc
caaccatcggcccaaccttccgagtctccgagttctcaaccttctgagagtccctcggaa
tctccttctgcgtctccatcggagacaccctcgtccaatccatcccgtagctgcgagaat
ttacgcacagattgtggctggggtatcttcaacccatggacttgtcaatgcgactgcccc
gttggcatttgtttggacggtaaccagcaatgctaccttacttgcactgaaactatcaac
acgaatccatttgctggatgtgctcctggatgggactgtccttggtttcccgacagctct
gctggtcattgcaagtcggagatgcacttgagccagcagtacgaaatataccgtactgca
tccgaatgttgcgaggctcacttcaaaggatcatcaacttgtttggatgacagtagagcc
tctcatgtgccttacccttggccgatctatcaagtcagaggcgactcgcctccccctggc
aaagatagcaaatggtatccggatctttcaaacaagattaactgtgtctacgggaagcga
tacgaggagtggatggcagctgatggctacgatacctactacctcttcccttcttctacg
aaatgttgtgatatgtggtaccctcaacgctctgattgccctgatacctcgggcgaagtc
agttcggaagttgaagacgaggcttggtacatggatccgtatccgatgaataactactac
ttccctgatttcactgcaagcaactgcgggtttggcagagattaccctgcttggatggga
gagaatgggtttgagaagtggtacttgtttacacgaggcaatgagtgttgtacccgctac
tttcctacagcatccaactgtccaatggagaacaccgttcaaacaggatactactgggag
agctaccaagcaaaccaagccaatgatgctgtgctaccaatcgtctacaatcacacgttc
tatccggatctcaatgccaacacatgcatcaatggtaccgattacccttcttggatggag
agtgacgaggtgtatatacgtctttacctttacaaagcagttggagattgctgtacgttc
tggttcggacagggtgcattgacagactgtgcaaactcggtgatccaaggggagtacatt
gactacaacgcaacaagttccccatcgtacaatgccactgctgagttgttggacatgtgg
tatcctcacctcgacgacaagacgtgcttgaaggatggcgaaactcctacatggatgaca
cagaatggatttgagaagtggtatttgttcaatacgagggaggcctgttgtgcggcgttt
ggatgcactttttag
DBGET
integrated database retrieval system
