Thalassiosira pseudonana: THAPSDRAFT_25485 Help Entry THAPSDRAFT_25485  CDS       T01078                                  Name (RefSeq) predicted protein   KO K12600   superkiller protein 3 Organism tps  Thalassiosira pseudonana Pathway tps03018   RNA degradation Brite KEGG Orthology (KO) [BR:tps00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     THAPSDRAFT_25485  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tps03019]     THAPSDRAFT_25485 Messenger RNA biogenesis [BR:tps03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ski complex      THAPSDRAFT_25485 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_2 TPR_14 TPR_17 TPR_1 TPR_7 TPR_12 TPR_11 TPR_19 TPR_5 Motif Other DBs NCBI-GeneID:  7444317 NCBI-ProteinID:  XP_002297056 JGI:  25485 UniProt:  B8LDC6 LinkDB All DBs Position 19 Genome browser AA seq 1810 aa AA seqDB search MSSTLNPKQLKELLTSLREAVKSLDDDNNNNPSPWSIQSAFSLLLVSELASRGIGVDIPP NIFSNGSSSSSEWILSLLEVIRSTAGKVPIDDASGGSSGTFPSPMMAGLNAAGGMAASAC SSCIAKCKESNVDDLLLLLPKEKSAVDSCEQTLQRCQEVNDGKFYTLLKLAFDVSKSTSD DEGTLEKKRTLQYQKRHELQQRLNAIAYSNYLYGASHFATDQPPMWKRCLDTALLLSDQH GAALNIGSINHRSYLNSLTILPLQNLIRIAKGNEKWKRAKELSLFVAVGYVGAVKERLDG MKDEVSGGDVVLTKGRGDGSKKIGQQSVHELIQIYFLDRTQSLVDLGQKSIESLLHSAEG ALSECNPPTSMSTTDADANFESVLLYRYVQVQIQYLGEESTIWTEVQRQFRAMKNRLPDG NEGGISVGEKSTATVSIGAKKTKSTAVAAKPTPTTPEEMESQTRTKLYIEAWNEWRSGAS NDDIDALSPLALRDAVIELSSLLPPADLHGDSSWFTTIDIVQDCYVSLKLQVNRLREIAI SFQKQCNKKKTEKDMSQDVALAWGAVLSFVSPLITNHLDKIVARDGDADGVGDGVIVELR PMLESASEAIITASWMCEPIARKVQGKEFQLIPQLLPMVHNCLTVCKKERSREEEQSLEQ AKKKSSVLSSHHRYSETEKKDMLLLECALSASRCRMELESAISNEAPTNVSVNSLAVVAR KATIAATSSVKTDVALKTSSLSSSSARAMFGSPFLQFISSWSGMYLSPWPFCTLGQARTI LRSARESLSVANKAWGRQLMSRLEDVLLDIGEADLEGSLAGGVTADSRRLYKQALDSISL LNGEGTKLMEAHCLLGLARLSMASDVEDSAIAAEKYARNALEILGMMDISQTDTLICLHA WDNPLLQSFSHAYHVCSSRQLVAEACLRSSRPDDAYSFLQSAVNEAPGNFEAAFALASYY LRSMLAGCSDGEESDGKQNEARNQLLKAAKMNKTNADPFALLGVYYEAQGDDTRAKGCYQ RALVIDASHPVAGRGLQRLLPLEEMQPFCEDAVKVNSPEIGWAWRVLGQLKSWKDGDDTS AVICFQQALRCRDVVQDPRTAALGIFYKDPKRSNADTLQNCEAGETWSELASCYRQLGKF SASLRAYDAAYSVSDGKLSPSALCACAQVELDLGLNEEAVRRCDEVLTFGDNPHIHRMAT VIEGSALLSLALTTQLEGKFGACLSNLEKAVLIMEALPMERNTYCELKLIGDLYSFAASL PPYAFAATVSTDNDEESATLQLTGVQRQIAFIAKGEQSYQTALALVTTTDENEDDRAFLI SAAATDLGTNLLSQATVISLAIGEGIGCETTTFASLFQDIIVKSVNAYISAIDASPHEAA AWSGIGCALGAIDPLMSQHAFSRALELDKSLADAWSNIALSYADIGHVAKSSEVLDALTQ AEDTPLMWICRGLLFEKTSVAWNEQVSARESCLAKAADAFRAALQISQYPAALFGLALTC RRTNLDSLASNDVVYSTLADKVSKSEALTSMTLHQNIIGNGNMSSCYVHGLLQMEKELDH IRVGDGRESIDAMKVVKSEVERARTRIQDEKESLSRRDTKPTHCEIDCGLSTSLKTKTKS DIPTDLINDAVSKVSAVTPSDNSAEDVEATYTFDARTMVCLNPESGEAWLTFAKELAREV SNDESNFGTEALLSAKTAASKAYNLLHDGVVNASLISPKIHEVSQNKSIEYSEMSVVSSF ASASLVSEAMALVTWLEVLEVLVGDTEISTTKSCVALQESLLLDPMNHMSLTALDLAVEG LEKSKVAVCI NT seq 5433 nt NT seq  +upstreamnt  +downstreamnt atgagcagcactctcaaccccaaacagctcaaggagcttctaacctctcttcgcgaggca gtcaagtccctagacgacgacaacaacaacaatccatcaccatggtcaatccaatcagcc ttctctctcctactggtcagcgaactcgcctctcgaggcatcggcgtagatatcccccca aacattttcagcaatggcagctcgtcgtcatctgagtggatcctttcactattggaagtg atccgtagcacagctggcaaagtccccattgacgatgcaagcggcggcagcagtggtacc tttccatctcccatgatggctggtttgaatgctgcgggtgggatggccgcttctgcttgc agtagttgtattgccaaatgcaaagaaagcaatgtggatgatttactactgctgcttcca aaagagaagagcgcggttgattcatgtgaacagacattgcaacgatgtcaagaagtgaac gatggaaaattctacactcttttaaagttggcatttgatgtatccaaatcaactagtgac gacgagggtacgttggaaaagaagaggacgctacaatatcagaagcgacacgaattgcaa cagaggttgaacgccattgcctattccaactacctctatggagcttctcatttcgcaacg gatcaacctcccatgtggaagcggtgtttggacactgccttgctgctaagtgatcaacat ggagcggcattgaacattggttccatcaaccatcgatcgtatctcaattcgctgacgatt ctaccactgcagaatttgattcgtattgccaaggggaatgagaaatggaaacgagcgaaa gagctgagtttgttcgtggccgtggggtatgttggtgctgtgaaggaacggcttgatggt atgaaagatgaagtgtctgggggagacgttgttcttacgaaggggagaggggatggttcc aagaagattgggcagcagtcagtacatgaactgattcagatctacttcttggataggaca caatctcttgtggatttggggcaaaagtcaattgaatcattgttacactcggccgaaggt gctttgagtgaatgtaatcctcccacatcaatgtccacgacagatgcagatgcaaatttc gagtcagtgctcctataccgctatgtacaagttcaaatccaatacctgggggaagaatca actatttggacagaagtgcaaagacaattccgtgcaatgaagaacagattaccagatgga aacgagggaggcatatccgtgggagagaagtcaacggcaactgtcagtattggggcgaaa aagacaaagtcaacggcagtagcggcgaagcctacccccactactcctgaggagatggaa agccaaacacgaacaaaactctatattgaagcatggaatgagtggcgaagtggtgcttca aatgatgacatcgacgccctgtcaccactggcgttgcgtgatgcggtcattgagttatcg tctctcttgcctccggctgatttacatggagattcttcgtggtttacgactatcgacatt gttcaagattgctatgtttcattgaagctacaagtgaatcggttgagggaaatagcgatt tcatttcaaaagcaatgtaacaaaaagaagacggagaaggatatgtctcaagacgttgca ctagcatggggtgcggtgctttcgttcgtttcgccactgatcacgaatcatcttgacaaa attgttgcaagagatggcgacgcggatggcgttggtgacggcgtgattgtggaactgcgt cctatgcttgaaagtgcgtcagaggctatcattactgcttcctggatgtgtgaacccatt gccaggaaggtgcaaggaaaggagtttcaactgatacctcagctactaccaatggttcac aactgtttgacagtgtgcaagaaagaacgatctcgggaggaagagcaatcacttgagcag gcaaagaagaagtcgtcggttttgtcgtcccatcatagatattcggagacagagaagaag gacatgctgctattagaatgtgcattgtctgcatcaagatgcagaatggaattggaaagt gccatcagcaatgaagcaccaacaaacgtctcggtcaattctctcgctgtggttgctcgc aaagcaacgattgctgcgacttcctccgtcaaaacagacgtcgccctaaagacttcgtcc ctctcctcctcttctgcacgggcaatgtttggatcacccttccttcagttcatttcgtct tggtctggaatgtacctttctccgtggccgttttgcacacttggacaggcacgtactatt cttagaagtgcacgtgagtcgttgtcagtagcaaacaaggcgtgggggcgtcaattaatg tcgaggctcgaggacgtgttgttggatatcggcgaagcggacttggagggttctttagca ggtggtgtcactgcggattcaaggcggctttacaagcaggcattggatagcattagcctt ctgaatggcgaaggaacgaagttgatggaagctcactgtcttctcggtctggccaggcta tctatggcgagtgatgttgaagactctgccatcgctgcagaaaaatacgcaaggaatgct cttgaaatacttggtatgatggatatatcccaaaccgacaccttgatttgcctccacgcg tgggacaatcctctactgcagagcttttctcatgcatatcacgtatgctcatcacgtcaa cttgtggcagaagcatgccttcggtcgtctcgtcccgacgatgcatattcgtttctacaa tcagcagtaaacgaagcacccggcaactttgaagcagcatttgctctcgcttcctattac cttcggagcatgctggcaggttgtagcgatggagaagagagtgatggaaagcaaaatgag gcaagaaatcaacttctcaaagctgccaaaatgaataagacgaacgccgacccgttcgct ctactgggagtttattatgaagcacaaggagatgacactcgcgcgaaaggctgctaccaa agagcactagtcattgatgcgtctcatcccgtagcaggaagaggcctccagcgattgttg ccgctggaagaaatgcagcctttctgcgaagatgcagtgaaagtgaattctcccgaaatt ggatgggcgtggcgggtgttgggacaactaaagtcatggaaggatggcgatgatacttcg gcagtgatttgctttcaacaggctcttcggtgtcgagatgtagtgcaggatcctaggact gcagcgttgggaatattctacaaagatccaaagaggtcaaatgcagatactcttcaaaat tgcgaggcaggagagacgtggtcagagttggcgagttgctatcgtcaattgggaaaattc tctgcctctctgcgagcatacgatgcagcatactcagtatccgatggaaagctgtctcca agtgctctctgtgcatgtgctcaagttgaacttgacttgggcctcaacgaagaggcggtg aggagatgcgacgaagttttaacttttggagacaatccacatatccacagaatggctact gtgattgaaggttctgcattgttgtctctcgcattaacaactcagttggagggtaaattt ggtgcatgtctgtccaaccttgagaaggctgtgttaataatggaggcactaccaatggaa agaaacacatattgcgaactaaagctgatcggtgatctgtattctttcgcggcttcgctt ccaccatacgcatttgcggctactgtctcaactgacaacgatgaggagagtgcaacctta caactgactggggtacaaagacaaatcgccttcattgcaaaaggagagcagtcgtatcaa acagctcttgctcttgtaacgacgacagacgagaatgaagacgacagagctttcttgatt tcagccgcggctacagatctcggtacgaacttgttatctcaggcaacggttatttccttg gcaatcggcgaaggaattggttgtgagacaacgacttttgcatcccttttccaggatatc attgtgaaaagtgtcaatgcctacatttctgccattgatgctagccctcacgaagcagct gcttggagtggaatcgggtgtgctcttggggcgatcgaccccttgatgagtcagcatgct ttctctagagctctcgagttggacaagtctctagcggatgcatggtcaaatatagcttta tcatatgctgacatcgggcacgtcgcgaagagctcagaagtattggatgcattgactcaa gcagaggatacgccactgatgtggatctgcagaggacttttatttgaaaagacgtcggtt gcatggaatgaacaagtctcggcaagagagtcatgccttgccaaagctgcggatgccttc cgagctgctctacaaatctctcagtaccctgctgctctcttcggcctcgcactgacatgt aggagaaccaatcttgattcgctagcatcaaatgacgtcgtatactcaacgttggctgat aaagtctccaagtcggaagcactcacgagcatgactttacaccaaaacattattggcaat ggaaatatgtcgtcctgctacgtgcatgggctgttgcagatggaaaaggagctcgatcat atcagggttggggatggtcgtgaaagtatcgacgccatgaaagtcgtcaaaagcgaggtg gaaagagctagaactcgcatccaagacgaaaaagagagcttatcacggagggacacgaag ccaacgcattgcgaaattgattgtggtttgagcacgtcgttgaaaaccaagacgaagagt gatattccaaccgacttgatcaatgatgcagtaagcaaagtatcggctgtcacccccagt gacaactctgctgaagatgtagaggcaacgtacacctttgatgctagaacgatggtatgc ttgaatcctgaaagcggtgaggcttggcttaccttcgcaaaagagctcgctcgtgaagta tcaaacgatgagtcgaacttcggcacagaagcactgttgtcggcaaaaactgctgcatca aaagcatacaatctactccatgacggtgtggtcaatgcttccttgatatctccaaagata catgaagtatctcaaaacaaatcaattgagtattcggaaatgagtgtggtatcctcgttt gcatcggcatcattggtatcggaagcaatggcattggtaacttggctagaagttttggaa gtattggtaggcgacaccgaaatatcgacgacgaaatcgtgcgtagctttgcaggagtct ctcctcttggatccaatgaatcatatgtcgttgactgcattagatttggcggtagagggt ttagagaaaagtaaggtagctgtgtgcatttag

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