KEGG   Thalassiosira pseudonana: THAPSDRAFT_268460
Entry
THAPSDRAFT_268460 CDS       T01078                                 
Name
(RefSeq) REV1 protein
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_268460
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    THAPSDRAFT_268460
SSDB
Motif
Pfam: IMS IMS_C BRCT_2 BRCT LIG3_BRCT IMS_HHH PTCB-BRCT
Other DBs
NCBI-GeneID: 7444747
NCBI-ProteinID: XP_002288287
JGI: 268460
UniProt: B8BXL1
LinkDB
Position
3:801305..805043
AA seq 1148 aa
MPSNSPPAKKKSVRFHSDIETTASAHSVSDILTNLKQRHSVIKPSKTRFGKLSRRSQYGE
ASTRSTTARVTEQSTPQYKSVLGVLDVLQKNHGTPSTRRKRKSSVSPKASVLESLDDSAA
SSSVDDGTSSKRRRESSRHSKKSVLEGLHSDDDGVSSSTNQTIQDGGKVTCKESDDSKAT
HSHAEGEPSTKQTHHDAELSKPFSFHASDIYLTKQSPSIEIAIHSSSTKRKPNYRPDLFF
AGVVILVNGHTSPDATTLMRLLHKHGGDLEKYETHRVTHIIAECLSTAKAKIYKKQRKPT
PVCRPEWIVDSVKKGVLLPYADYLLDDVMDKDTFGTKSVKTFFSENNCNRKAMASCEEAT
KTGVVSSPKQAQRSPVEDSNSSPDVTSSKNRWQDTDKGNGNYLLNGQVRTVGNDPNFLDS
YFSNSRLSYIGSFKQRAKTSTRAARSQPKVGSTKFVLLVDMDCFFASVSLRRYPQYRNQP
VAVGHTGTVVLPCNYNNQKIVGTNLKNSSSELSTCNYIARKFGVRKGMFLGDAIMVCPDL
IVLPYDFEGYEEVSSIVADELVRYAQRFHGCLEQVSCDEAYLELNLSPDDCEDSNVEDFV
KFLAEQIRAYIVNKTECTASIGIGSNKFLAKLAADKVKPDASYLVEDWQTFLNGLTLRDL
PGIGRKFEKKMTPHHLRTVNDIWELGDSAESILGEIIGRGNALKILQFCGGKDDRAVTPA
ARKSIGAECNYGVRFDGPYGVDYMLAGLSKEVEKRMTLAEVRGSKLVLKVMKSRDASKQP
GKFLGHGACDSLSKSIDIPLTRKSDAITAAAMRLFEQLSIDECLIRGMGLVVNSLVTDGD
ASSKTSPSKLSLWLKKDTTKSNDSPQHEDCHTSRQVSFAIEDNENVRNTDEDGGVDDGNA
QSSLRTMANHMPTFSQLDQDVLTELPADILKEVQSIYGRDDFRQASPKTSKHRMTTRSPK
SKPVAPSLPGQLSVKRMFKLASVKSGGSQFNTNTVFSLSQLDCLPFETQLQIANGDDVKI
SKTNRRKVKHGIDSHHPNEQGFEDHLSEAARTNEAEPEIDFYQANIVPLEEYILSHPNPS
TDDVEVVQQFLRVCIKEHRVNDTVIFLRAIKNMSEGWGTPHYIKLKQAVVDETFTSHEVQ
LDTAWLGL
NT seq 3447 nt   +upstreamnt  +downstreamnt
atgccatccaactctccaccagcaaagaagaaatcagtacgctttcatagtgacattgaa
acaaccgcatctgctcactccgtgtcagacatattgaccaacctcaaacaacgacactcc
gttatcaaaccaagcaaaacgagatttggcaaactatctaggagaagtcaatatggggag
gcatcgacgcgaagtactacagcacgcgttacagaacaatctacaccgcaatacaaatca
gttctgggggtgttggacgtcctacaaaagaatcacggcactccatctactagacgaaaa
cgaaagtctagtgtatctccgaaagcttctgttttagaatcactagatgatagtgcggct
tcgtcatcggtggatgatgggacttcgtcgaagaggaggagagagagttcacgacatagt
aaaaagtctgtgttggagggattgcattctgatgacgatggcgttagctcgagcactaat
caaacaatacaagatggagggaaggtgacatgcaaagagtctgatgattcgaaagcaact
cattctcatgctgaaggagaaccgtcgacaaagcagacacaccacgatgcagaattatcc
aagcccttctcgtttcacgcatcagacatctatctcactaaacaatctccatcaatagaa
attgcaatacacagtagctcgaccaaaagaaaaccaaattatcggccagatctcttcttc
gcaggtgtcgtaatcctcgttaacggccacacgtcacccgatgcaacaactctcatgaga
ctccttcacaaacacggaggtgacctcgaaaagtacgaaacacatcgtgtcacacacatc
attgcagaatgtctctctacagctaaggcgaaaatttacaagaaacaaaggaagccaaca
ccagtttgtcgaccagagtggattgtggatagtgtcaagaagggagtgttgttgccgtat
gcggattacctgttggatgatgtcatggataaggatacctttggtacgaagtctgtcaag
acgttcttttctgaaaacaactgtaacaggaaagcaatggcttcatgtgaagaagcaaca
aagacaggagtggttagttcgccaaagcaggcgcagagatccccagtcgaagactcaaac
tcgtcaccagatgttactagtagcaagaaccgatggcaagatactgacaaaggcaatgga
aattatctactcaatgggcaagttcggactgtcggcaatgatcccaatttcttggattct
tatttcagcaactcgagattgagctacattggaagtttcaagcagcgagcaaaaacaagt
acacgtgccgcacgttcccaaccaaaggttggatctacaaagtttgtccttcttgtcgac
atggactgtttctttgcatcggtctctcttcgcagatatccacaatacaggaaccagcca
gtagctgtcggacacactgggacagtggtactaccttgcaactataataatcaaaagata
gttggcacaaacctcaagaattcgtcgtcggaattgtcaacgtgcaactacatcgcaaga
aaattcggtgtacgaaagggtatgttccttggagatgcgattatggtgtgtccagatcta
attgtgcttccatatgactttgaagggtatgaggaagtatccagtatcgttgctgatgaa
cttgtacgttatgcacagcgatttcacgggtgtctggagcaggtgtcgtgtgatgaagct
tatctggaactcaatctaagcccagatgactgcgaagacagcaatgttgaggactttgtc
aagtttcttgctgaacagattcgtgcatatattgtcaacaaaacagaatgcactgcgtcc
attggaataggatcaaacaaattcctagcaaagctcgccgcagacaaagtcaaaccggat
gcatcgtatctagtggaagattggcagacgtttctgaatggcctgactctacgtgacctt
cctggaatcggacgtaaattcgagaagaagatgactcctcatcatttacgcacagtgaat
gacatatgggagttgggagacagtgctgaaagtattctaggcgaaatcatcggccgaggc
aatgctctaaagatacttcagttctgcggtggtaaagacgatcgagcggtaactcctgca
gctcgcaaaagtatcggtgcagaatgcaactatggagtacgtttcgacggcccgtatggt
gttgattatatgcttgctggtctttcaaaggaggtagaaaagcgaatgacattggctgag
gttcgtggatcaaaactagtactcaaggtaatgaagagcagagacgcatctaagcagccg
ggcaagtttcttggtcatggggcttgtgatagcctctccaagagtattgacattccattg
acccgcaaaagtgatgccataactgcagctgctatgagactttttgaacagttaagcatc
gatgaatgcctcatacggggaatggggcttgttgtcaactctctcgttactgacggagat
gcatcttcaaagactagtccatcaaagttgtcgctgtggctcaaaaaggataccaccaaa
tcaaacgatagtccacagcatgaagattgtcacacgtcaaggcaagtgagttttgccatt
gaggataatgaaaatgttcggaataccgacgaagacggtggagttgatgatgggaatgct
caatcttcacttcgcacgatggcaaatcatatgcctacattcagccaactagatcaagac
gtcttaacagagttaccagctgacatattgaaggaagtacagtcaatatatgggagagat
gactttcgtcaggcttcgccaaagacctcaaagcatcggatgacgacgcgatctcccaag
tcaaagccggtagcaccttctcttcctggacaattgagcgtgaaacgtatgttcaaattg
gcgtcggtcaaatcaggagggtcgcagtttaatactaacactgtattctccctcagtcag
cttgattgccttccatttgagacacagcttcagattgccaacggcgatgatgtaaaaata
tccaaaacaaacagaaggaaagtgaaacatggcattgattcgcatcaccctaacgagcaa
ggttttgaggatcatctttctgaagcggcacgtaccaacgaggcggagcctgaaattgac
ttttatcaagccaacatagtgccactcgaagagtacatcctgtctcatccaaaccctagc
accgacgacgtcgaagttgttcagcagtttctacgtgtgtgtatcaaagagcatcgtgtt
aacgatactgtaatctttcttcgtgcaatcaagaacatgtcagaaggatggggcacccca
cattatattaagttgaagcaagctgtggttgacgaaacatttacttctcatgaagttcaa
cttgacacggcctggcttggcctgtga

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