KEGG   Thalassiosira pseudonana: THAPSDRAFT_268735
Entry
THAPSDRAFT_268735 CDS       T01078                                 
Symbol
GPB1
Name
(RefSeq) heterotrimeric G protein beta subunit 1
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
tps  Thalassiosira pseudonana
Pathway
tps03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    THAPSDRAFT_268735 (GPB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tps03009]
    THAPSDRAFT_268735 (GPB1)
Ribosome biogenesis [BR:tps03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    THAPSDRAFT_268735 (GPB1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Utp13 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_IFT140_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st CFAP251_N NBCH_WD40 Beta-prop_NOL10_N WD_LRWD1 Beta-prop_Nup120_160 ASA1 WDR54 Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR75_2nd WD40_RFWD3 DNAI3_WD UTP15_C RPN1_RPN2_N
Other DBs
NCBI-GeneID: 7443711
NCBI-ProteinID: XP_002289885
JGI: 268735
UniProt: B8BZX6
LinkDB
Position
4:complement(1595683..1599608)
AA seq 1059 aa
MARQSKKKAPQPKEGPSSSENDDASASSDGIEEGSSSNNEKEQDDADLQSKGSNSDSGNS
ESDNDVGNNMELESPTKEQAETMEEDDDEEMDDGSSSDDEQEANNNTPAASAPPPISKSW
TTLTTHSPCYTGGTVAFSHSPTSINSIANTNITNSGETPHHEQQHFILAQRGGDVSIIEA
STGLLVRTIHDEESMDAEAITAFALSPNNKEVVVVTRGHLVRRYSLVDGVVSISFGKSGH
TLPVTNVAFHESGIFFATGSVEGLVKVWDGRNGFATHALYPTSSGGASSKGRYAVTCLQW
KPTATSLILAIGREDGSVSIHDLLLNTHDSKKASLPVAVMRDHVSAVTCVAWSEGVGGGL
FFSSGRDSVINTWLSTKVTYLRIRTLPVYEQVESMILLSRRFRPVSETKEQQEVLDRKDV
VLATCGTKGIIRLWKASPTGKEGAHSISDLSPLASQSEQDAFGEENGGYTSLHLTSLSTT
HLSPLLVAVDAEHNMTFVKIGWKDSGLGFSTDRTIVGHNGEILDLAVIPPGTSPNTNDKH
TIAVATNSSQVRIFGLADAKKDELGMLDGHSAIVLAIDASPCGRYLATAGKDKTMRVWHI
ASQKCVGVATGHTEAVGSVALSNKIGSGAFVVTASKDRTLKVWPLAGSATMNKAARSGDE
LTLRARLSARAHEKDINIVSVAPNDSLIATGSQDKTVKLWRSTDLALHGTLKGHKRGVWD
CQFSPHDRVLVTASGDKTVKLWSIADCSCVRTFQGHMAGVLRVRFLTTGLQLVSSGSDGL
VKLWTIRTNECESTIDAHDDKIWALDLSPCGTALFSGGADSKIAVWRDTTKERDDASREA
EEQNIFMEQKLSNHLRHKQYEEALEIALELDKPHQVLRVLTEIVEKDTKSNRGVETLQKH
AVKWPLNRLTQILRYCREWNTRARNSHVAMLVVKAVVTTIPAAKLASYEGIPEILAGIAP
YAERHFDRLDGMVGNSYLLDFSLFSMGSLHGDNDETYGNWLDRSRYVLPPKVIDGRIQVG
GSLVVGAKQDKDSDDDSSSDSSVVTIGDSDTSDDDSDSN
NT seq 3180 nt   +upstreamnt  +downstreamnt
atggcacgtcaatctaagaagaaggctcctcagccaaaggaaggccccagctcttcggaa
aacgatgatgcctctgcttcatctgatgggatcgaggagggcagcagcagcaataacgaa
aaagagcaagatgatgccgatttgcaaagcaagggtagcaatagtgacagtggaaattca
gagagtgacaatgatgtaggcaataacatggagttagaatcgccaactaaagaacaagca
gagacaatggaagaagacgacgatgaggagatggatgatgggtcatcatccgacgatgaa
caagaggcaaacaacaacacaccagcagcatccgctccgccacctatctccaaatcatgg
accactctcacaacgcacagcccatgctacacaggcggcacggttgccttttcccactct
cccacatcgatcaacagcatcgcaaacacaaacatcaccaacagtggagagactccccat
cacgaacaacagcactttatacttgctcaacgaggaggcgacgtttcaatcattgaagca
tctactggattattggtcaggacgattcatgacgaggagtcaatggacgcagaggccatc
actgcctttgcattgtcacccaataacaaagaggtggttgtggttacgaggggacatttg
gttaggaggtacagtttggtggatggcgtagtatcaatttcgtttggcaaatcaggccat
actctaccggtaacaaatgttgcctttcacgagtctggtatcttcttcgcgacgggttca
gttgagggcttggtcaaggtgtgggatggaagaaacggatttgcaactcatgcactgtac
ccaacctcttcgggaggtgcttccagtaagggtcgatatgcagtgacttgtcttcaatgg
aaacctactgctacatcacttattcttgccatcggtcgtgaggatggatccgtctcaatt
catgatctgttgttgaatactcacgatagtaagaaagcatcactgccagtagctgtgatg
agggatcatgtgagtgctgttacgtgcgtcgcttggtctgagggcgttggtggggggttg
ttcttttcgtctggaagagattcagtcatcaatacttggttgtctaccaaagtgacgtat
cttcgcatccgaacgttgccagtgtatgagcaagtggaaagtatgatattgttgtctcgg
agattccgccctgtctctgaaacgaaggagcagcaggaagtccttgatcgtaaagatgta
gtgctggccacgtgcggtacaaagggaatcatccgtctatggaaagcatcacccactggg
aaggagggggctcattcaatatcagacttgtcgcctctggcttcgcagagtgaacaagat
gcatttggggaggagaacggtggatatacttcgcttcacttgacgagtttgtctactact
catttgagtccacttcttgttgctgtagatgccgaacataacatgacgtttgtaaagatt
ggatggaaagatagcggccttgggttctccacggatcgaacaattgttgggcacaatgga
gaaatcctcgatcttgcagtgattcctcctggtacttcgcccaataccaatgacaaacac
acaatcgcagttgccacaaatagctctcaggttcgcatctttggtcttgccgatgcaaag
aaggatgagcttggaatgctcgacgggcactcagccattgtcttggctattgatgccagt
ccttgtggtcgataccttgccactgctgggaaagataaaacaatgcgagtatggcacatt
gcatctcagaaatgtgttggcgtggctacaggacataccgaggcagtaggatcggtagca
ttgtccaataagattggctctggtgcattcgtagttactgcgagtaaggataggactttg
aaggtttggcctcttgctggatctgcaacgatgaacaaagcagcgagaagcggtgatgag
ttgacattgcgtgctagattaagtgcacgtgctcacgaaaaggatattaacatcgtgtca
gttgctccaaacgactctctaattgcaacgggatctcaggacaaaacagtcaagctttgg
cgttccactgatcttgcattgcacggtactctcaaaggtcataagcgaggagtatgggac
tgccaatttagtcctcatgatcgtgttttggtaacagcaagtggagacaagacagtgaag
ctttggtcaattgccgactgcagttgtgttcggacctttcagggacatatggcaggagtt
cttcgggttagattcttgacgactggattgcaattggtttcttcgggatcggatggcttg
gtgaagctatggacaattcgaacgaatgagtgtgaaagcacaatcgacgctcatgatgac
aagatctgggctcttgacttatctccttgcggaacggcactgttcagcggtggtgcagat
tcgaagattgccgtatggcgtgacacaacgaaagaacgagacgatgcctcgagagaggcc
gaggagcaaaacattttcatggagcagaagctgtccaatcatttgcgacacaagcagtac
gaagaagcacttgaaattgcattggagctggacaagccacatcaggttttgagggtcctg
acggagatcgtagaaaaggataccaaaagcaaccgtggagtggagactcttcagaagcac
gcagtgaagtggccgttgaatcgtcttactcaaatattgcgttattgccgagagtggaac
actcgagctaggaactcgcacgtagctatgctcgttgtaaaggcggtggtgacgacgata
cctgctgcaaagctggcctcgtacgaggggattcctgagatactagctggtattgctccc
tatgctgagcgacattttgatcgccttgacggaatggtgggaaactcttatctgttggac
ttttctctgttttcaatgggtagtcttcatggggacaatgatgaaacctacggaaactgg
cttgacaggagtagatacgttctaccaccaaaagttattgacggcaggattcaggttgga
ggctctcttgttgttggggcgaaacaagacaaagacagcgatgatgattccagctctgat
agcagtgttgttactatcggtgacagcgataccagtgatgatgatagtgatagcaattag

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