Thalassiosira pseudonana: THAPSDRAFT_270340
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Entry
THAPSDRAFT_270340 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03404
magnesium chelatase subunit D [EC:
6.6.1.1
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00860
Porphyrin metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
THAPSDRAFT_270340
Enzymes [BR:
tps01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.1 magnesium chelatase
THAPSDRAFT_270340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mg_chelatase
VWA_2
AAA_lid_2
Sigma54_activat
MCM
AAA_16
VWA
AAA_5
AAA_22
Sigma54_activ_2
Mito_fiss_reg
VIR_N
AAA_7
AAA_28
E2R135
AAA_3
T2SSE
CDC27
Motif
Other DBs
NCBI-GeneID:
7452481
NCBI-ProteinID:
XP_002288014
JGI:
270340
UniProt:
B8BVG3
LinkDB
All DBs
Position
2:complement(1951994..1954494)
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AA seq
790 aa
AA seq
DB search
MPRPRRTAAALTIAAAVGLTAAFSPSPFGRISRNAIHTPSSQWKLNSAVVSEAEERARAA
MAAEEAAKNVGPAIGKQADQMVSGGRPFPLSMIVGQDNIKQALLLSAVNNRMGGVVISGG
KGTGKSVMARALHQLLPPIEVIKDSPFNIDPAGEFGIDDFLRTDLDNGGVPLEERETEVI
AAPFVQVPLNVMEDRLIGSADLEESVKSGKSVFSPGLLAKAHRGVLYVDDINLLDEETAN
ILLNVVTEGKVIVEREGISLTYPCRPLLIATFNPDEGELRDHLLDRIAIALSADAEKMDI
ASRVSATDSVLGFSPGAKQATPEAEKALEEAIENEDDLKTAIVFAREFLRDLTIAPSQIQ
YLCEEAIRAGCQGHRAEIFACEVARAAAALEGRQVTSDDLRLAVKLAIAPRGTFINTPMD
PDEMMPPPPPPPPPPPMDQQDDQSENEEEEKEEEEQEEQDEPDEEDENNDSPDVPEVPQE
FMFDVDATPMDPDLINFSSRERSGKGGGRGLIFSQDRGRYIKPMLPKGKVIRLAVDATLR
ASAPYQKGRRERSIGTKNEGRGVFIEQSDVRTKKMARKAGSLIIFVVDASGSMALNRMNA
AKGAAMSLLTEAYQSRDQICLIPFQGDRADVLLPPTRSIAMAKKRLEAMPCGGGSPLADA
LQTATLTGLNAQKTGDVGKVVVVCISDGRANVPLCVSKGEEFDPDADEDSKDGKPSRQYL
KDEVLACAKQMGVLPGFNLLCIDTENKFISTGVAKEIADAAMGKYHQIAKADGNAIASVT
SQALNAIKNS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtcctagacgaacggcagcggccctcaccatcgccgcagcggtaggtctcacg
gccgccttctctccgtctccctttggcagaatatcacgtaatgccatccacactccatcc
tcccaatggaagctcaactctgccgttgtgtccgaggctgaagaacgtgcacgtgccgcc
atggcagccgaggaggcagcgaagaatgttggacctgcaattggaaagcaagcggatcaa
atggtgtctggtgggcgtccattcccattgtccatgattgtagggcaggataatattaaa
caggcgttgcttctatcggcggtcaataaccgtatgggtggagtggtgatttcgggagga
aagggaactggcaagtctgtcatggcacgtgctcttcatcaattgttgcctcctattgag
gtcatcaaggatagtccattcaacattgatcctgcgggcgagtttggaattgatgatttt
ttacgtactgacttggacaatggtggagttcctcttgaggagcgtgagacggaggtcatc
gcagcaccatttgtgcaagttccactcaatgttatggaggatcgtctgattggatcggct
gatttagaagagtctgtcaagtctggaaagtctgtctttagtcctggtcttcttgcaaag
gcccaccgtggagttctttacgtggatgacatcaatcttcttgatgaagagactgccaac
attctgttgaatgttgtcaccgagggaaaggtgattgtggaacgtgagggaatctccctt
acctacccttgcaggcctcttctcattgctacattcaaccctgacgagggtgagcttcgt
gaccatctccttgatcgtattgccatcgcactcagtgccgatgctgaaaagatggatatt
gcttctcgtgtatcggccacggattccgtcttaggattctctcccggtgcaaagcaggcc
acccccgaagctgaaaaggcacttgaggaggctattgagaacgaagacgatctcaagaca
gccattgtgtttgctcgtgagttcctcagggaccttacgattgctccatctcaaatccag
tacctttgtgaggaggccattcgtgctggatgtcagggacatcgtgctgagatctttgca
tgcgaggtggcccgtgccgctgctgccttggagggacgtcaagttacctcggatgatttg
cgtcttgctgtaaagcttgccattgctcctcgcggaaccttcatcaacactcccatggat
cccgatgagatgatgcctcctccaccacctcctccgccgccgccgccgatggatcagcag
gatgatcagagtgagaacgaggaggaagagaaagaagaggaggaacaagaagagcaggat
gagcctgatgaagaagacgagaacaacgacagtccggatgtgccagaggtcccccaagag
ttcatgttcgacgtggatgccaccccaatggaccccgatctcatcaacttttcttcacgt
gagaggtctggaaagggaggtggacgtggtctcatcttctcccaagaccgtggtcgttac
atcaaacccatgctgcccaaaggaaaggtcatccgtcttgcagtggatgccactcttcgt
gcatctgccccctaccaaaaaggtcgtcgtgaacgttctatcggcaccaagaacgaagga
cgtggtgtcttcatcgagcaatctgacgtgcgaaccaaaaaaatggcgagaaaggctgga
tctctcatcatctttgttgtagatgcatccggatcgatggctctgaaccgtatgaacgct
gccaagggagcagccatgtctcttctgacggaagcctaccaaagtcgtgatcaaatttgt
ctcattccattccagggagatcgtgccgatgttcttcttccaccaacgcgttccattgcc
atggcgaaaaagcgtttggaggcgatgccctgtggtggaggatctcctcttgccgatgct
cttcagactgctacgctcacaggacttaatgcccaaaagactggagatgttggtaaggtc
gttgtcgtgtgcatctctgatggacgtgccaatgtcccactctgtgtatcaaagggtgag
gagtttgacccagatgccgatgaggattcgaaagatggaaagccatcgagacaatacttg
aaggatgaggtgttggcatgtgccaagcagatgggagtgttgcctggattcaatcttctt
tgcattgatacggagaacaaattcatctcgacgggagttgcgaaggagattgccgatgca
gctatgggcaagtaccaccaaattgccaaggcagatggaaatgctattgcatcggtgaca
agtcaggctttgaatgcgatcaagaactcataa
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