Thalassiosira pseudonana: THAPSDRAFT_31316
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Entry
THAPSDRAFT_31316 CDS
T01078
Name
(RefSeq) hypothetical protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
Fer4_7
EKR
Fer4
Fer4_6
Fer4_9
Fer4_10
Fer4_8
Fer4_2
TPP_enzyme_C
PFOR_II
Fer4_21
Fer4_16
Fer4_18
Fer4_4
Fer4_15
Fer4_17
Motif
Other DBs
NCBI-GeneID:
7445620
NCBI-ProteinID:
XP_002286672
JGI:
31316
UniProt:
B8BQ74
LinkDB
All DBs
Position
1:complement(885054..889589)
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AA seq
1192 aa
AA seq
DB search
AVANASYRMNDIAYIFPITPSSVMGELVDEWSATDDGQGKKKFLNLWNQELKVVEMQSEA
GAAGALHGALNSGSLATTYTASQGLLLYIPNLYKISGELLPTVIHVAARALTGQALSIYG
DHSDVMLVRGTGLAMVSSFNVQEAHDMAVITQVATLNSRVPFLHFMDGFRTSHEISKIQL
VSDEQLKELMPWEKVEEHRQRALSPLHPSQRGTAQAPDVFMQLVESSNKHYQAVNSIFGK
AMEDFARVVGRHYKPFEYHYFGSTTPTIAVVTMGSSVEVVKETLKCMNMEQACVIGVRLF
RPWSPADFCKVLPKTVKRIATLDRTKESGAQGEPLYMDVCASLMSCNRQGIFVAGGRYGL
ASKDFSPRMALAVVQNLMRKDVGSIQHPFTVGIIDDVTHLSLNLGKDVNPLPENVTQCVF
WGFGSDGTVGGNKETIKIIGDSRTDMSVQAYFEYDAKKSSGWTISHLRFSDSHTLSAPYK
VQDCQANYVACHNESYAAANKFDVVRFSKKGGTFFLNTKIASIDSPDKRIKEFYSSCRAL
RKVKFYIMDADRLASTYGLKGKINMICMSAFFRLSGVLPIDEAVALLKKSITKSYSYKGD
DVVKKNHDILDAVCSDPRYLLEVEVPSRWRRATLTDERRAYANRHIALIDDEKTRKFMEE
IAEPVSHLEGDNIPISKFLSNEMLGGTMQPGTTRYEKRRPNPSALIPKWNASACTQCNQC
VAVCPHAVIRPFIITRDEAEQAPHPDQFQTVKALGTELAGKRYTLQISPLDCTGCNACVE
ACPEAPKALEMQDVEDVLSKGGEDNWNFAMTLPERGDLVDKYTVKGSQFQTPLMEFSGAC
SGCGETPYFKMLTQLFGERMIIANATGCSTIWGGSFPSNPYTVSKKTKRGPAWANSLFED
NAEYGFGMFSAMKHRRERLIQLVQEYWLECRDEKSDKCTYLFDKMQPLFEVLLSNKSNGR
QSKLEMIYSDRDMFPKLSQWIVGGDGWAYDIGYGGLDHVEAFEANDVNVLVVDTEMYSNT
GGQASKSTPAGAAVKFAMGGKQQTKKNMGEIFMTYEHVYVASVCLSNQTQLLQALVEADR
HNGPSFIVCYAPCIQQQVRPEGLNDMFDECRFAVDSGYWPLYRYNPNLINEGKNPFILDS
KKLRREVASFLKREGRFINLKKAHPEIANDLFNKMNYDVHHRMENMLSRAAG
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
gccgtcgcaaatgcttcttatcgtatgaatgacattgcctacatcttcccaatcacccca
tctagcgtgatgggagagcttgtagatgagtggtctgccaccgatgatggtcaaggaaag
aaaaagttccttaatctatggaatcaagagctcaaagtggtggaaatgcaaagtgaggct
ggtgctgcgggtgctttacatggagctttgaactctggaagtctcgcaacaacatatacg
gcaagtcagggcctgctgctctacattccaaacctctacaagatatctggagaactcttg
cctacagtcattcacgtagcagcgcgagctcttacaggtcaagcactcagtatttatgga
gaccattctgatgtcatgcttgtgaggggaactgggttggccatggtatcctcgttcaac
gtacaggaagcccatgacatggcagtgataacacaggtggcaacattgaacagtcgagtg
ccattcctacatttcatggatggatttcgtacaagtcacgagatcagtaagattcaactc
gtcagcgacgaacaactgaaagaactgatgccgtgggagaaagtagaggagcacagacaa
cgtgctttgtcgcctttgcacccgagtcaacgaggtacagcacaggctccagacgtattt
atgcagcttgtcgagagcagcaacaagcactatcaagcagtaaattcaatctttgggaag
gcaatggaggatttcgcacgagttgttgggaggcattataaaccgtttgaatatcactac
tttggatcaacgacgccaactattgcagtcgtcacaatggggtcgagcgtggaagtcgtt
aaagaaacactgaaatgcatgaacatggaacaagcttgcgtcattggagtaagattgttt
cgtccttggagccctgccgacttttgcaaagtccttcccaagaccgtgaaacgaattgca
acacttgacagaaccaaagaaagtggtgcacaaggagaaccgttgtacatggacgtgtgt
gcatctctgatgtcatgcaaccgacaaggcatctttgtcgccggtggaaggtacgggtta
gcaagcaaagacttctcgccgaggatggctttggcggttgtacaaaacttgatgaggaag
gacgtaggaagtatccagcatccgttcactgttggcatcattgacgacgtgacacactta
tctctcaatctgggcaaggacgtaaacccgctgcctgagaacgtcacgcagtgtgtcttt
tggggcttcggcagtgatggaaccgtgggagggaataaggagacaatcaaaatcattgga
gactcacgtacagatatgtcagtacaggcgtactttgaatatgatgcgaagaagtcaagt
ggttggacaatttctcatttgaggttctccgactctcacactttgagtgccccttacaaa
gtgcaagactgccaagcaaactatgtggcttgtcacaacgaatcttatgctgcggctaac
aaatttgacgttgtaaggttcagtaagaagggaggcaccttcttcctcaataccaagatt
gcatcaattgattctcccgacaaaaggataaaggagttctactcttcttgcagagctctg
cgaaaagtcaagttctatattatggacgcagaccgactagcatcaacttatggtttgaaa
ggaaagatcaatatgatatgcatgagtgccttctttcgcttatctggcgttcttccgatc
gacgaagccgtggcattgctgaaaaaatctattaccaaaagctactcatacaaaggagac
gatgtcgtgaagaagaatcacgatatcttggacgcggtatgctcagaccctcgatatcta
ctggaagttgaggtgccatcgcggtggcgacgagctacattgacagatgagcgtcgtgct
tatgctaatcgtcacatcgctttgattgacgacgagaagacacgcaagttcatggaagaa
atcgctgagcccgtctcgcacctcgagggagataacattcctatctcaaagttcctttcg
aatgaaatgcttggaggcactatgcagccagggacgacacggtacgagaagcgaagaccc
aatcccagcgccttgataccaaagtggaatgcaagtgcatgcacgcagtgcaaccaatgc
gttgctgtgtgtcctcatgcagttataaggccattcattatcacaagagacgaggcggag
caagcaccccaccctgaccaattccaaacagtaaaggccttgggaacggaactggctggt
aaacgttatacactgcaaatatcacctcttgactgcacgggatgcaatgcatgcgttgaa
gcgtgtcccgaggcaccaaaagctcttgaaatgcaagatgtcgaagatgtactctcaaag
ggaggcgaggataactggaactttgcaatgacactgccagaacgaggagaccttgttgat
aagtataccgtcaaaggctcccagtttcagactcctctaatggaattctctggtgcctgt
tctggatgtggagagacgccatatttcaaaatgctaactcagctcttcggagaaaggatg
attatcgcaaacgcgactggctgctcaacgatttggggcgggtctttcccgtcaaacccc
tacacagtatcgaagaagaccaagagaggacctgcttgggctaactcgctttttgaagac
aacgcagagtatggctttggaatgtttagtgcaatgaagcatcgtagagagcggctcatt
caactcgtacaagaatattggcttgaatgtcgtgacgaaaaaagtgacaaatgcacttat
ctttttgacaagatgcagcctctgtttgaggtgctactatccaacaaaagcaatggtcgt
caatcaaagttggagatgatatattccgatcgcgacatgtttcctaaattgtcgcagtgg
atcgtcgggggtgacggttgggcttacgacattgggtacggaggtcttgatcatgtggaa
gcatttgaggcaaacgatgtcaacgtgttggtagtcgacacagaaatgtatagtaacacc
ggaggccaagcctccaagtctactcctgcaggagctgctgttaagtttgcaatgggaggc
aaacaacagacgaagaagaacatgggcgagatcttcatgacatacgaacatgtgtatgtt
gcatcggtgtgtctttccaaccaaacacaactactccaagcattagtcgaggctgacagg
cacaatggaccaagtttcatcgtgtgttatgcaccgtgtatccaacagcaagtgcgacct
gaaggcttgaacgatatgtttgatgaatgtcgcttcgcagttgatagtggctattggcct
ctgtatcgatacaacccgaatttgatcaatgaaggaaagaatccgttcatcctagacagc
aaaaagctgaggcgagaagtcgcgtcattcctcaaacgcgaaggacgattcatcaaccta
aaaaaagcacaccctgagattgccaacgatctcttcaacaagatgaactatgacgtacac
caccgcatggagaatatgctgtctcgtgctgctggg
DBGET
integrated database retrieval system
