Thalassiosira pseudonana: THAPSDRAFT_5212
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Entry
THAPSDRAFT_5212 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Gene cluster
GFIT
Motif
Pfam:
Smr
zf-CCCH_2
zf_CCCH_4
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
7446401
NCBI-ProteinID:
XP_002290160
JGI:
5212
UniProt:
B8C2A1
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Position
5:625332..627002
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AA seq
556 aa
AA seq
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MKQAYTNTIRGGSRNPLTIATGAGKKGGRGKAKQVVPKCAYGLACTRKGCAYRHPESGAY
EDPRSKICKPFLAGLCTYGSRCINRHPDDKEADAVKATYKQKSCSYGDECQTEGCLYFHP
YEALERSVEEHVDPTAGELCGAVGGLHLDSQQPTYEEWLAMNCPAPPSVDETQLHSMWYY
PGSEMQRDPWDVYCLMYPKQSNARDLHATTSMTNLSAVTQSWEPSANLVATSQSWRPLAS
AATNDFPQQQQQINDPKTFEEWKKTGCPYPSWFCSDHDPWYDDEGLRRSLKEVYEVLYGE
NAQTRFEEHEAQQTALDFPTPAEVVAAPQSKEPTVTTTTSPASGGWASIAAKRPDPAVLQ
QNSTTSNSQSVVATTRPATNKKTPHKTIVIPKEVWLPDTANADCFHLYPDPIQRFIAVND
HHKTYLASVSIPKCFDSTSSNFSSINSNRGGKNGENVTLLDVHFQSAKTVYPVLYRFLPQ
ALKDNDEVWIITGSGSHIEAGHQRRGDKSGGVLFNAVKNFLLENEENMGMEYRVGKDTSG
GKNAHSAGAFLVRKTT
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagcgtacaccaacacaatacgcggaggcagccgaaatcctctcacaatcgcc
acgggcgcagggaagaagggtggcagaggcaaagcgaagcaggtagttccaaagtgcgca
tacggtctcgcatgtactcgaaaaggatgtgcctatcgtcaccccgaatccggtgcttac
gaagatccgcgaagcaagatttgcaagcccttcttggccgggttgtgcacgtatggaagt
agatgcattaaccgtcatccagacgacaaggaggccgatgcagtgaaggcgacatataag
caaaagagttgttcgtatggggatgagtgccaaactgaggggtgcctttactttcatcca
tatgaggcgttggagaggtcagttgaggaacacgtcgatccgactgctggagaactttgt
ggagctgtaggagggcttcatttagattctcaacaacccacatatgaagaatggcttgca
atgaattgcccagcacctccttctgttgacgaaacacaacttcacagcatgtggtactat
ccagggagtgaaatgcaaagagatccatgggatgtatactgcctgatgtacccaaaacaa
agcaatgcccgtgatttgcatgcaacgacttcaatgacgaatctcagcgctgtaacacaa
tcatgggaaccatctgcgaatcttgtcgctacatcgcagtcttggcggccgttagcatct
gcggccaccaatgatttcccacaacaacaacaacaaatcaatgatccaaagacgtttgag
gagtggaagaagactggctgtccatatccgtcgtggttctgttctgatcatgatccatgg
tacgacgatgaagggctgcgacgaagtctgaaagaagtgtacgaagtgctgtatggagag
aatgctcaaactaggttcgaagagcacgaagcacaacaaactgctttggactttccaact
cctgcagaagttgttgcagctccacagtcaaaggaaccaacagtcacgacaacaacttca
ccggcgtcgggaggttgggctagcattgcagcaaaacgtcctgatccagccgttctccag
caaaactcaacaactagcaacagtcaaagtgtcgttgctacaacgagacctgcaacaaac
aagaagactcctcataagaccatcgtcattccgaaagaagtttggctaccagatactgca
aacgcagactgcttccacttgtatcctgacccaattcaacgcttcattgcagtgaacgac
catcacaaaacatatcttgcaagtgtcagtattccaaaatgttttgattcaacaagttcc
aatttcagcagcatcaattccaacagaggtggaaagaacggtgaaaatgttaccctcttg
gacgtacactttcagtcagcaaaaacagtgtatccagtgctctatcgcttcttacctcaa
gcattaaaggacaacgacgaagtgtggatcattacaggatcaggatctcacattgaggct
gggcatcaacgtcgtggagacaagtcaggcggtgtcctcttcaatgcagtcaagaacttt
ttgttggaaaacgaagagaacatgggaatggaatatcgcgttggcaaagacacgagcgga
ggaaagaatgcccacagtgctggggcttttctcgttcgcaaaacgacgtaa
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