Tatumella ptyseos: NCTC11468_01842
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Entry
NCTC11468_01842 CDS
T05493
Symbol
oprB_1
Name
(GenBank) Outer membrane protein D1
KO
K07267
porin
Organism
tpty
Tatumella ptyseos
Brite
KEGG Orthology (KO) [BR:
tpty00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpty02000
]
NCTC11468_01842 (oprB_1)
Transporters [BR:
tpty02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC11468_01842 (oprB_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
SQK74836
UniProt:
A0A2X5NNU9
LinkDB
All DBs
Position
1:1654376..1655728
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AA seq
450 aa
AA seq
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MDNSGKYGPFKPSVIITALFLSSSALATVPDYSVLGFEAPREGLLGDSGGLRSGLQARGF
TYSLGYLSQTALNMAGGYNSHSKAEYIDQFSLTFNQNLEALTGIPDAAIEGNIVNRNHNN
NLTSSRLQNPSIPFNDLAQESWGGQSITRLGWLTFSRSFLDHRLSWRVGLINKVQTFDQS
IPCDFQVLSQCGGKSANAMLWNNWNVHSWGTTLAYKLTPEWTLKAGVMEQNPRVADRSHA
WSWSTRGSRGALFPVEAELKTQVNGLPGVYNVGALLTNARQQHLSRGVSQPDGSRDPQGY
RTYGTTGFIWASGNQQITRHPDDASRGMSISWSGSLSDQRTNRVRLTSSLSMRYRGLLDA
RPEDWLGLGVSYIKMSGYANEQLQFASQGQFPGGNGYPAISHSVNAELYYRIRATSWLEL
QPDIQYWHNPGGAGSTPDAWVAGLKTVVSF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggataattcagggaaatacggcccttttaaaccttcagtcatcattacggcattattt
ttatcttcatcagcgctggcaaccgtcccggattacagtgttctggggtttgaagcgccc
cgggaaggcttgcttggcgattcgggaggcctgcgttcgggactgcaagcccgcggcttt
acttattctctcggctacctcagccagacggcgctcaatatggcgggcggctataacagc
cacagtaaagcggaatatattgatcagttctccctgacctttaatcagaatttggaagcc
ctgaccggtattccggatgcagcgattgaagggaatatcgtcaaccgcaaccataacaat
aatctgactagctcgcgtctgcaaaatccctcgattccctttaacgacctggctcaggaa
agctggggcgggcagtcgattacccgtctgggctggctgacgttttcgcgcagtttcctg
gaccaccggctctcctggcgggtgggactgatcaataaggttcagacctttgaccagtct
atcccttgtgattttcaggtattaagtcagtgcggcgggaaatccgccaatgccatgctg
tggaataactggaatgttcatagctggggcaccacactggcctataaactgacaccggag
tggaccctgaaagccggggtgatggaacagaacccgcgtgtggcggatcgcagccatgcc
tggagctggtcaacccggggcagccgcggggcattgttcccggtcgaggcggaactgaaa
acgcaggtcaacggactgcccggcgtctacaacgtgggggcactgctgaccaatgcccgc
cagcagcacctttcccggggtgtgtcgcaaccggatggcagccgggatcctcagggctac
cgtacctacggaactaccgggtttatctgggcgtcaggtaaccagcagatcacccgtcac
ccggacgatgccagccgggggatgagtatttcatggagtggcagcctttcggatcagcgt
actaaccgtgtgcggttgaccagttcactgtcgatgcgttatcgcggattactggatgcg
cggcccgaagactggctgggactgggcgtcagttatattaaaatgagtggttacgcgaac
gagcagttgcagtttgccagccaggggcagtttccgggagggaacgggtatccggctatc
agtcattcggtcaacgccgagctgtattatcgcattcgcgcgacgtcctggctggaactg
cagccggatattcagtattggcataatccgggcggtgccggcagtacgccggatgcctgg
gtcgccgggctgaaaacggtggtttctttctga
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