Tsukamurella pulmonis: TPB0596_01220
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Entry
TPB0596_01220 CDS
T08311
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tpul
Tsukamurella pulmonis
Pathway
tpul00521
Streptomycin biosynthesis
tpul00523
Polyketide sugar unit biosynthesis
tpul00541
O-Antigen nucleotide sugar biosynthesis
tpul01100
Metabolic pathways
tpul01110
Biosynthesis of secondary metabolites
tpul01250
Biosynthesis of nucleotide sugars
Module
tpul_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tpul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
TPB0596_01220 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
TPB0596_01220 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
TPB0596_01220 (rfbC)
Enzymes [BR:
tpul01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
TPB0596_01220 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BDD80359
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All DBs
Position
121913..122467
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AA seq
184 aa
AA seq
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MRIEQTDLADVLLLVPTPHADDRGLFTRTFDADVFDEYLGERGAAARFVQDSQSRSVRGV
IRGMHGRSGRGEAKLVRCAHGAVHDVLVDARPYSPTFGRSRAFRLDDETFHTLYVPPGFL
HGFQALTDVADVCYRIDRPHDPSEDLAVHHADPELALQWPLAASIVSARDRAAGTWAQLR
GRLG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgagcagaccgacctggccgacgtcctgctgctggtccccaccccgcacgcg
gacgaccggggcctgttcacccgcaccttcgacgcggacgtcttcgacgagtacctcgga
gagcgcggcgcggcagcgcgtttcgtgcaggattcccagtcccgctcggtgcgcggcgtg
atccgcgggatgcacggccgatcgggtcgcggcgaggccaagctggtgcgctgcgcgcac
ggtgcggtgcacgacgtgctggtcgacgcgcggccgtactcgccgacgttcggccgcagc
agggccttccgactcgacgacgagaccttccacaccctgtacgtgccgccgggcttcctg
cacggcttccaggcgctgaccgacgtggcggacgtctgctaccggatcgaccgtccgcac
gatccgagcgaggatctggcggtgcatcacgcggatcccgagctggccctgcagtggccg
ctggccgcgtcgatcgtctcggcgcgcgaccgggcggcgggcacctgggcgcagctgcgc
ggccgcctgggctga
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