Turneriella parva: Turpa_2804
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Entry
Turpa_2804 CDS
T02157
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
tpx
Turneriella parva
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpvB
FG-GAP_3
RHS_repeat
FlaE
Motif
Other DBs
NCBI-ProteinID:
AFM13443
UniProt:
I4B836
LinkDB
All DBs
Position
complement(2900580..2907869)
Genome browser
AA seq
2429 aa
AA seq
DB search
MAAKVVFSSISSTMLCMRCLLLFILFMSIMPVHAGVNPDGSFSETLPIEIPVGRNGVQPQ
LALTYNSNAGNGIVGVGFSLQGLPAITRISYGRGINYDGQDTYVGPEGRLVPLPTSPTSG
GGVYHAENETWSKYEPLGNDGQALTVSNRCGPSTGSGQVEPPVVSPVEPCQWRVTDRSGV
VYSYGANSQSRALAIDAAGNPLHSGAVRQWALTRVTDLNGNYYEVEYYQNAGQIYPKRIR
YTYGPGASKYYTITFAYDESSRPDKEISYASSSFVQTNWRLREVLVDAEQPIWWIFSWTV
QVRRYELGYDTNHSNTSSELASWSVTAGNQVSTTQLRWLQESQGFETSSQYSPPWVQHYW
GVSNGVQGDYVDFDGDGLVDFLLSFRDLPGNNYQVAYRNTGHGWVQDARYTPQWIQHFWG
VTNGRYGHYVDITGDGLIDYVVSSRDLAGNVSKIAYINTRNGWQLKAEYTPLWVHAYWGV
ENGVQGDYLDFDGDGLTDYVVSFRDLAGQNYTAAYRNNGHGWVLDSRFAPGWIQNYWGRT
TTINSPGGPWLQITGTINGRFGDYIDVNADGLPDFIASSRDLAGNVSRLAYINTGSGWLE
TAEFTPPWIRHYWGVTNGTTGDYLDVNGDGLPDYVASFRDLANNHSQTTWLNTGRGWREN
TAFRASWTHYYWAWECATWCHQSTAAWGGGNSGEYIDINGDGRVDYVLSFSDLPGNNTVA
AWINTNAGWTSSSDYVTSWIHNYWGVSAPYGDFVDFNGDYVPDYMISSRDLPGNIAIAAV
ANRKKIGKSLLQEILSPTGTKIIIQYKTATKLPKAICTTACTGPQGEALGTSAGLPNSSP
RYLVTEVTTTGDRDLTGDGVVDSFTTRYEYYNGRVATGTVAERASLGFEKIVTRDVNSGN
YKIDTYRQDKPFQGYMSVSRSYLADNTLVSEQYSPTTLQQYYCSEVGCSTNAANDPTPSS
PRQIRATGESETRSYENGILIGRKFQEVLSQDIYGSPLIMKTGVTANGTTRTVYKFIQYI
NENTATNRALGVAYSEKTCYTATECATGDNDFISESRISYDGGALGTIGSRHLPTKRENY
VLTGDGVGVWLAEQYTYDTAGNILTHLDARGFLNTIVYDPDYNQFPVSVTKSHAGKSSTV
TAAYDPRYGKKILETIVDEGTTITTNLDATGFVTQVTVENGSTTLAKNSSHRAAAGASPI
WGESCTHFGAAFTQSRCTKNFKDAMGRTYREEYPELVNGVEKQMAIEHKYDSRGRAVAIS
QPFDATSGSASQWSTRTYDIYGRVVQAQSFDGKTTSTVFQTTGLPAGIVSCTVATDTDGK
QQQACNNIHGKAAFTVESYGAPEATRIDYIYDGRGRLAAVTAPQGITTIGYVSISGIQAF
VDDPISGRTDFTYYNVPGSASFGQLASETRAGKTTSFEYSASFGRMSKITRPDSVTTFTY
DETDAEVGSHGINKPTTLIHQVNGYTLRERYRYNAKSDITEMKRWISHATETLCSDPGAM
PCFQRYAFSTDNLDRAETITYPDGNTTELTYVGATEHVAEIKHAGLTFATYSNYTYDVMA
HIGKVTYGNGLVHDYTYQPATGVMQTVSIGKANQPEKLNLTYAYDASFNISSITDNVIPD
LSVTYQYDVLNRIRQSSYGSGKIRDFRFDQDGAGNSKGNLLRKGNRRMTYAVGKTYPVAD
ELYNETTSQWEPHQTMTWSAAGSLLTKGNFSYEYDSNQMMTKAVEANTAETEFVYDHTGQ
RFLKKHTRDGVTIKTWYVADGLELREKYVGVTSGNPPGIFDSWQATKYIYGQDRKRIASI
TGNVKTSAISPTPTELFALAEGYSASTFGGMAMKTYYTFYGIYAHENLGRVLRIILLSAL
ALVLLLWLYYNSLSADENFGGAFFRRLIAVSMITVFVSVNCGQNAPPTGVTPGQISTIIS
ELYTGLPAGTVYYSHNHLGSGSLVTDTNGDEIFRITYTEYGEIDLENSGKWNSTTQTLEQ
NMSDAEILITAVKFTGQEYDPETGFYYYNARYYSAELGVFTTSDTEFDSGSGYGFNRHMY
VGGNPIMASDPSGHFVWFIVAAVVIGAIMGGTKGNPFKGENWKNFSGTGALIGALAGLAG
ALTGGAAAAGLTGLNAAVVGGMAGGAAGGFVGGAGTAWANGASFGDGLLAGFAGGVMGAI
VGAAAGAAFYGAGQLFGGSGGGAGAATADAGGRPCPIGQCSWGGEVTATDAGSGMAAAAP
AAAPSTAGGASGAAANAAALGGGTGGSYGGAQAATLVSRSNSTSKAPPGKTVYGFDQETG
VLYPTQMGRETFASLKDYCWSAPYDSMRGCSEPGITSAPVFPSDWLPFNLKSLFKFGATR
GARMVPQAYKFGKHVLGRMESRGVNSAMVDKALRLGKRYYDPKNKTTNFVLSGGFASGKD
LLVGVGPTGTISTVIRGSKLVRPRFVPIN
NT seq
7290 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaggttgtcttttctagtattagcagcacgatgctttgcatgcgctgcttg
ctgctgtttattctgttcatgtctatcatgccggttcatgccggcgttaacccagacggt
agtttttctgagacattgccgattgaaatacccgtggggcgcaatggcgtgcagccgcag
ctggcgctcacttacaattcgaatgctggtaatggaatagtgggtgttggttttagtctg
cagggcttgcccgcaattacgcgcatcagctatggacgcggcatcaactacgatgggcaa
gatacttatgtcgggcctgaagggcggcttgtccccctcccgacctcccccacgagtggg
ggaggtgtgtaccatgctgagaatgaaacgtggtcgaagtatgagccgttgggtaatgat
ggtcaggcgctgaccgtcagcaatcgctgcggcccttcgacaggctcagggcaggtggag
ccgcctgtggtgagccccgtcgaaccatgccagtggcgtgtgaccgatcgcagcggcgtc
gtctattcgtatggcgcgaatagtcaatctcgcgcgctggcaatcgatgcggcgggaaat
ccgcttcattcgggtgccgtgcgccaatgggcgttaacgcgcgtgacagacctcaacggc
aattattacgaagtggaatattaccagaacgccgggcagatttacccgaagcgcattcgc
tacacctatgggccgggtgcgtcgaagtattacacgatcacattcgcgtatgacgaaagc
agccgccccgacaaagagatcagctacgcgtcttcgtcgttcgtgcaaaccaattggcgc
ctgcgcgaagtcttagtcgacgcagagcagccgatctggtggattttcagttggaccgtg
caggtgagaaggtatgagttgggatatgatacgaaccacagcaatacctcgagcgagctt
gctagctggtctgtgacggctggcaatcaggtttcgacaacgcagttacgttggctgcaa
gaatctcaagggtttgagaccagctcgcagtatagtccgccttgggttcaacattactgg
ggggttagcaacggggtacagggtgactatgtggattttgatggtgatggcttagtcgat
ttcctattgagttttcgtgatctgccgggaaataattaccaggtggcctaccgaaacaca
ggtcatggctgggttcaagatgcccgatataccccccagtggattcaacatttttgggga
gttaccaacggccgctacgggcactacgtggatattactggcgacgggctgatagactac
gtagttagttcacgagatttagccgggaatgtctcgaagattgcctatatcaataccaga
aacggctggcagcttaaggcggagtatacaccactctgggttcatgcatactggggagtc
gaaaacggagttcagggcgattatttagattttgatggtgatggtctgacagattacgtg
gtcagcttccgtgatttggctggacagaattatacagcagcgtacagaaacaatggtcat
ggctgggtgttagattcacgcttcgcacccggttggatacagaattactggggaagaacg
accaccatcaactcaccggggggcccttggctacagataaccggcacaatcaacggtcga
tttggtgattatattgatgtaaacgccgatggtttgccggatttcattgccagttctcgc
gatctggcagggaacgtatcgcgacttgcatacataaacacaggcagcggctggttagag
acagcggaatttacaccgccttggattcgacattattggggtgtaactaacggtacaact
ggcgactatcttgatgtcaatggtgatgggttacccgattatgttgcaagttttcgtgac
ttggctaataaccacagccaaacaacatggttgaacaccggccgcgggtggcgtgaaaat
actgcattcagggcttcatggactcattattactgggcatgggaatgtgcaacctggtgt
catcagagtacggcggcttggggtggtggcaatagtggggaatatatagatatcaatggt
gatggtcgagtggactatgtcttgagcttcagcgatttgcccggaaacaacacggtagca
gcttggatcaatacaaacgctggctggacttcatcgtcagattatgtgacttcatggatt
cacaactattggggtgtttcggcgccttacggcgacttcgtggacttcaatggcgattat
gtccctgactacatgattagctctcgtgatttgcctggcaatattgcgatcgctgctgtg
gcaaatcgaaaaaaaataggcaaatcgcttctgcaagaaattttgagcccaacaggcacc
aaaatcataatccaatacaagaccgcgaccaagctccccaaagccatctgtaccaccgcc
tgcactgggccacaaggcgaagccttggggaccagtgcaggcctacccaactcttcaccc
cgctatctcgtgaccgaagttacgacgactggcgaccgtgacctgacgggcgatggtgtg
gtagatagtttcacgacgcggtatgaatactacaacgggcgcgtggcgacgggtacggtt
gcggagagggcgtccttaggatttgagaagatcgtcacgagggatgtaaatagcgggaat
tacaagatcgatacttaccggcaagacaaacctttccaggggtatatgtctgtcagtcga
agctatttagccgataacacgctggtttcggaacaatactcgcctacgacattgcaacag
tattattgttcagaggttggctgttccaccaatgcggcaaatgacccaacgccttcatcg
ccccgccaaattcgcgcaacgggtgaatcagaaacacgttcttatgaaaatggcatattg
ataggccgcaagtttcaggaagttctgagtcaagatatatacggcagtccgttgattatg
aagactggggttaccgcgaatggtaccacgcgcaccgtttacaaattcattcagtacatt
aatgagaacaccgcgactaatcgggcgctgggtgtcgcttattctgaaaaaacctgctac
acggcgacggaatgcgcgaccggggacaatgattttatttctgaaagccgtatctcctat
gacggcggcgctttgggaacgattgggtcaagacatctgccgacaaagcgggaaaactat
gttttgaccggtgacggtgtcggcgtctggcttgctgagcaatatacttacgatacagct
ggaaatattttgacgcatctagatgcccgaggatttttaaacactatcgtttatgaccca
gattacaaccaatttccggtaagtgtgacgaaaagtcatgcgggtaaatcatcaaccgta
acggcggcgtatgacccaagatatggaaagaaaatcctggaaactatcgtcgatgaggga
actacaattaccaccaatctggacgctacaggttttgttacccaagtcaccgttgaaaac
ggttcaaccacgcttgcaaaaaattcttcccatcgtgccgctgccggcgcctcgccgatc
tggggagaaagctgcacacactttggtgcggcttttacgcagagccgatgcacaaagaat
ttcaaagacgcgatggggaggacttatcgcgaagaatacccagagctagtaaatggcgtc
gaaaagcagatggcgatcgagcacaagtacgatagccgtggtcgcgcagttgcaatttcg
cagccatttgacgccacgagtggtagcgcaagccaatggagcacaagaacttacgacatt
tacggtcgcgttgtacaggcacaatctttcgatggtaaaacgacaagcacagtttttcaa
acaacgggcttaccggcaggcatagtatcatgcactgttgccaccgataccgatggcaag
cagcaacaggcgtgtaataacattcatggcaaagctgcattcacagtggaaagctatggt
gcgccagaggctacgcggatagattacatctacgacggtcgtggtcgcttggctgccgtg
actgcaccgcagggaatcacaactatcggttatgtgagcatatccggcatacaggctttc
gtagacgaccccatttcgggacggacggattttacttattacaatgttccgggttcggca
agtttcggacaacttgcaagcgagacccgcgcaggcaaaacgacgagttttgaatatagc
gcgtcatttggccgcatgtcgaaaatcacccgacctgattcggtcacaactttcacctat
gacgagaccgacgcagaggtgggtagccatggcatcaacaaaccgactacgttgattcat
caggtaaacggctacacacttcgggaacgctacagatacaacgctaagtcggatatcacg
gaaatgaagcgctggatttcgcacgcaactgaaacactttgctctgatcccggtgccatg
ccttgttttcaaaggtatgcctttagcactgataatctagaccgtgcagaaaccatcact
tacccggacggcaacacgacagaactcacctatgtaggggcgaccgagcacgtcgcagag
attaagcacgccggattaaccttcgccacgtacagcaactacacttatgatgtcatggcg
cacattggcaaagtgacgtatggtaatggcttagtacacgactacacctaccagccagca
acgggcgtaatgcagacagtaagcatcgggaaggcaaatcaacctgaaaaacttaatctg
acatatgcttacgatgcttcgtttaacatatcgagtattactgacaatgtaatccccgac
ctttctgtaacctatcaatatgacgtattgaaccggatacgacagtcgtcgtatggctct
ggaaaaataagagattttcgtttcgatcaagatggcgctggcaatagcaaaggtaatctt
ttgcgcaaaggcaaccgccgaatgacttacgcagtgggcaaaacatatcctgttgcagac
gaactttataacgagaccacgagccagtgggagccacaccagacaatgacttggtcggcg
gcaggcagtctcttaaccaagggtaatttcagctacgaatacgattcaaaccagatgatg
acgaaggccgtagaagccaatacggcagaaacagagttcgtttatgatcacaccggccaa
cgttttctgaaaaaacatacgcgtgacggcgttaccattaagacatggtatgtcgccgac
gggcttgagttgagagaaaaatacgtcggtgttacaagcggcaatcctcccggaatcttc
gacagttggcaggcgacgaaatacatttatggccaagatcgtaagcgcattgcttcgatc
acaggcaatgtgaagacgtctgcaatttcgccaaccccaaccgagctttttgctttagct
gaaggttattcggcttcgacctttggcggcatggccatgaaaacctattatacattctat
ggtatctatgcacacgagaatttaggcagagttctgcgaatcattcttttgagcgcatta
gctctggtgcttctgttgtggctttattacaattcgctaagtgcggatgaaaattttggc
ggcgcatttttccggcgtttgatcgctgtttcaatgatcactgttttcgtttcggtaaat
tgcggtcagaatgccccgccgaccggcgtcacaccggggcaaatcagcacgattatttct
gaactctacacgggattaccagcaggaacagtttactactcacacaatcatttaggcagc
ggaagtttagtcacggatacgaacggcgatgaaattttccgcattacttacacagagtat
ggtgaaatcgatctagaaaattcaggcaaatggaattcaacgacacagacgcttgaacag
aacatgagcgacgcggagatcttgattactgcggtcaaatttacgggacaggaatacgac
ccggagacagggttctactactacaacgcacgatactattctgcagagcttggcgtattt
acgaccagcgacacggaattcgattcgggtagcggctacgggtttaatcggcacatgtac
gtgggcggcaatccgattatggcaagtgatccgtcaggacatttcgtttggttcatcgtt
gcagcggttgttattggtgcgatcatgggcggcacgaaaggaaacccattcaaaggcgag
aactggaagaatttcagtggtacgggcgcattgatcggcgctcttgctggcttagcaggc
gcactcaccggcggcgcagcggcagcagggttaacaggacttaacgctgccgtggttggc
ggcatggctggcggtgcagctggtggctttgtcggtggcgctgggactgcttgggcgaac
ggcgcgagttttggtgatgggttgcttgctggttttgcaggtggggttatgggtgcgata
gtcggcgctgctgccggcgctgcgttctacggtgctggtcaattatttggcggttccggc
ggtggtgccggtgcagccacagcagatgccggcggaaggccatgcccgatagggcaatgt
tcttggggcggcgaagtaactgcaacagacgccggtagtggtatggccgctgctgcgcct
gcggctgccccctcgacggctggcggcgccagtggtgcagccgccaatgcggcagctctg
ggtggtggcaccggtggttcgtatggtggcgcccaagcagcaacgctcgtatcacgctct
aattcaacgagcaaagcaccgccaggtaagacggtctacggctttgatcaagagacaggt
gtactatatccaacgcaaatgggtcgggaaacgttcgctagtctaaaggactattgttgg
tcggcaccatatgattctatgcgcggttgcagtgagccgggaattacgagtgccccagtg
tttccttcagattggctgccgtttaatttgaagagcctttttaagttcggcgcaacgcgc
ggcgctcgcatggtaccacaagcatataaatttggtaaacatgtgcttggccgaatggag
tcgagaggtgtaaatagcgcaatggtagataaggctctgagactggggaagcggtactat
gatcccaaaaataaaacgacaaactttgtcctgagcggtggctttgccagcgggaaagat
ttgcttgtaggtgttgggcctactggtacaataagcactgtgattcgcggctccaaactg
gtaagaccgcgttttgtgccgataaattag
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