Truepera radiovictrix: Trad_1840
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Entry
Trad_1840 CDS
T01254
Name
(GenBank) Oligogalacturonide lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
tra
Truepera radiovictrix
Pathway
tra00040
Pentose and glucuronate interconversions
tra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Trad_1840
Enzymes [BR:
tra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
Trad_1840
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
ADI14956
UniProt:
D7CQH2
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All DBs
Position
complement(1980036..1981208)
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AA seq
390 aa
AA seq
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MSVGRIWNDEPFRYRDPHSGREVTQLTRYKGHSNHLYFTDPCWTGDRSFIFTSDREGRSN
LFHYDLAEHRITQLTDLDLASRPGGCYSQANRAHYFGDAERLYELELRTLGLRELFRAPR
DFVLGERFAPTADGAYVCGTLTERAAFAGEASVPYSYSRFVEFFEKRPLTRVVRIAVATG
EAETLHEDRCYLGHVNPSPTQPHLLTFCHEGPWARVDHRIWGLDMVRGQLWKIRPQDDGV
AVGHEYWHQDGRYLGYHGFPRTGPRRGFFGAIRPDNTGREEFDFPFHSWHFQSNGLDLVV
GDGTQPSVPNAVPFIMLFKREGERFVGPRLLAMHRSTFNDQHAHPHPRFAPDGQHVLYTS
DLTGYANLYWVAVGDFYDLPEVAVARGVTE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttggccgcatctggaacgacgaaccctttcgctacagggacccgcatagtggg
cgagaggtcacccagctgacccgctataaggggcactccaaccacctctacttcaccgac
ccctgctggacgggcgaccgctcgttcatctttacctccgaccgcgaggggcgctccaac
ttgtttcactatgacctcgccgagcaccgcatcacccagctcaccgacttagacctcgcc
agccgtcccggtggttgctacagccaagcgaaccgggcgcactacttcggggacgctgag
cgcttgtacgagctcgagctgcgcacgctggggctgcgcgagctcttccgcgccccgcgg
gacttcgtcctgggcgagcgcttcgccccgaccgccgacggcgcctatgtctgtggcacc
cttacggagcgcgccgctttcgccggcgaggcgagcgtcccctacagctactcgcggttc
gtcgagttcttcgagaagcgaccgctgacccgggtcgttcgtatcgcggtggcgaccggc
gaagccgagacgctgcacgaggaccgctgctacctggggcacgtcaacccgagcccaacc
cagccgcacctcctgacgttttgtcacgaaggcccttgggcccgcgtcgatcaccgcatc
tgggggctagacatggtgcgcggccaactctggaaaattcgtcctcaagacgacggcgtg
gccgtcggacatgagtactggcaccaagacgggcgctacctcgggtaccacggctttccc
aggacgggcccccggcggggttttttcggggcgatccgcccggacaacaccgggcgagag
gagttcgacttcccctttcactcctggcactttcagagcaacggtctagacctcgtcgtc
ggcgacgggacgcagccctcggtgccgaacgccgtgccctttatcatgctgttcaagcgc
gagggggagcgctttgtcggtccgcgcctgctggcgatgcaccgcagcaccttcaacgac
cagcacgcccacccgcacccgcgctttgcccccgacggccagcacgtgctctacacttca
gatctcacgggttacgcgaacctgtactgggtcgcggtgggtgacttctacgatcttccc
gaagtggcggttgcgcgcggggttacggagtaa
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