KEGG   Trichoderma reesei QM6a: TRIREDRAFT_22881
Entry
TRIREDRAFT_22881  CDS       T02991                                 
Name
(RefSeq) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03030  DNA replication
tre03410  Base excision repair
tre03420  Nucleotide excision repair
tre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TRIREDRAFT_22881
   03410 Base excision repair
    TRIREDRAFT_22881
   03420 Nucleotide excision repair
    TRIREDRAFT_22881
   03430 Mismatch repair
    TRIREDRAFT_22881
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tre03032]
    TRIREDRAFT_22881
   03400 DNA repair and recombination proteins [BR:tre03400]
    TRIREDRAFT_22881
Enzymes [BR:tre01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TRIREDRAFT_22881
    6.5.1.6  DNA ligase (ATP or NAD+)
     TRIREDRAFT_22881
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     TRIREDRAFT_22881
DNA replication proteins [BR:tre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TRIREDRAFT_22881
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     TRIREDRAFT_22881
DNA repair and recombination proteins [BR:tre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TRIREDRAFT_22881
   NER (nucleotide excision repair)
    Other NER factors
     TRIREDRAFT_22881
   MMR (mismatch excision repair)
    Other MMR factors
     TRIREDRAFT_22881
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase PNKP_ligase PARM
Other DBs
NCBI-GeneID: 18484205
NCBI-ProteinID: XP_006967369
JGI: Trire2_22881
UniProt: G0RQA6
LinkDB
Position
Unknown
AA seq 877 aa
MAPKQATLGKFFGAKAGAPVRQTTLSFATKTGSKATAKDKAEEDGSDGDASTKENSDPEK
DTKKRPRSPKKSQDAVSSQAGDKMDVDEDEAPVTKRARRTRVKVEDDEDDTPQSSPKKEE
APSSPPAKKKRSPSPPKSSSRSRSSSPKPTQIKKEKKSAAVEDSDEVMKDESSSESASEA
ESESEEKEKVTAKARKAQQTMLQKHEKDPYPDWKPGTPVPYAALCKTFSLIELTTKRLII
MEHCSRFLRQVMRLTPDDLLPTVLLMINKLAPDYAGIELGIGESLIMKAIGETTGRSLQV
IKADQKEIGDLGLVAVKSRSKQPTMFQPKALTVRGVHQGLMNIATVSGNGAQGRKVDGIK
KLLSASDAYLKEKVDITKDKGGPSEAKYIIRFLEGKLRLGLADRTVLVSLAQAVVAHEAE
QKGKIPSTTDLENGESILKTVYSELPSYDVIIPAMLKYGIFNLREHCKLRPGVPLKPMLA
KPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYVAKDASEDLSAPAAGVAKPAASGVSCI
FSRNSEDLSKKYPDILEKLHTWVKEDTKSFVLDCETVAWDVTEKKVLPFQQLMTRKRKDV
KAEDIKVKVCVFAFDLLYFNGEAVVEKSLRERRELLHTAFTPVEGEFAFATHMNGQELDE
IQSFLDESVKASCEGLMVKMLDGKESGYEPSKRSRNWLKIKKDYLSGVGDSLDLVVIGAY
YGKGKRTSVYGAFLLACYNASTDTYETVCNIGTGFSEQVLEDLYAQLSQITISRPKPFYS
HSSGGQHQPDVWFEPKYVWEVKTADLTLSPRYKAGWKEGVDPAGEKGISLRFPRFIKIRD
DKKPDEATSSRQVAEMYRKQESVTKNKGPSVDDDFEY
NT seq 2634 nt   +upstreamnt  +downstreamnt
atggctccgaagcaggcgaccctgggcaagttctttggggcaaaggctggcgcgccagtg
aggcagaccacgctgtcttttgcgaccaagacggggagcaaggcgactgccaaggacaag
gctgaggaggatgggtctgacggcgatgcgagcacaaaggagaactcagatccagagaag
gacaccaaaaagcggccacggtcacccaagaagagccaggatgcggtttcatcacaggcc
ggcgacaagatggatgtggacgaagatgaagctcccgtgacaaaacgagccaggcgaact
cgggtcaaggttgaggacgatgaggacgacactccccaatcgtcgcccaagaaggaagaa
gccccaagcagcccccctgccaagaagaagagatcgccgagccccccaaagtcgagctcc
aggtcaagatcatcgtcgccgaagccaacccagatcaagaaggagaagaaatctgctgcg
gtggaggactctgatgaggttatgaaggatgagtcgtcctcagaatcggcatcagaggct
gagagcgagtcggaagagaaggaaaaagtcactgccaaggcgcgcaaggcccaacaaaca
atgcttcagaaacacgaaaaggacccgtatcccgactggaagcccggtacccccgtgcca
tatgcagccctctgcaagaccttttccctgattgagctgacgacgaaacggttaatcatt
atggagcactgttcacgcttcctgcgtcaagtcatgcgcctcacgcccgacgacctcttg
cccactgttcttctcatgatcaacaagctcgcccctgactatgcaggcatagagctaggc
attggcgaatctctcatcatgaaagccataggtgaaacaactggacgaagtcttcaggtc
atcaaggctgatcagaaagagattggcgacttgggcctggttgctgtgaagagcagatca
aaacagccaaccatgttccagccgaaggcgctgaccgtgaggggcgtccaccaaggactg
atgaacattgccacagtcagcggcaacggtgctcagggtcgcaaggtcgatggtatcaag
aagctcttgtctgcgtcagatgcgtatctgaaggaaaaggtggatatcacaaaggataag
ggcgggccaagcgaggcaaagtacattatccggtttctggagggcaaacttcgacttggt
ttggcagacaggaccgttctggtctcactagcccaagccgttgtggcccacgaagcggag
cagaagggaaagattcccagcaccacggatctggagaatggcgagtctatcctcaagacg
gtttacagtgagctgccgagctacgatgtaatcattccagcgatgctcaagtatggcatc
ttcaacctgagagagcactgcaagctacgaccgggtgtgcccctaaagcccatgctggcc
aagcctaccaaagccatcacagaggtcctggaccgctttgaaggccagacgtttacttgc
gagtacaagtacgacggcgaacgtgctcagatccattacgtcgccaaggatgcttcggaa
gacttgagtgcgcccgctgcaggagtcgccaaaccggctgcctcgggagtttcatgcatc
ttctcccgcaactcggaagacctgtccaagaaatatcccgatatccttgagaagctccac
acatgggtcaaggaagacacgaagagctttgtgctcgactgtgagactgtcgcctgggat
gtcacggagaagaaggtcttgcctttccagcagctcatgactcgcaagaggaaagacgtc
aaggccgaggacatcaaagtcaaggtctgcgtctttgcctttgatttgttatatttcaat
ggcgaggccgtggtggagaagtctctccgcgagcgaagggagctcctccacactgcgttc
accccagttgaaggtgaattcgcctttgccacacatatgaacggtcaggagctggacgag
atccagtctttcctcgatgagagcgtcaaggcatcttgcgagggtctcatggtgaagatg
ctggatgggaaggaaagtggatatgagcccagcaagcgaagtcgaaactggctcaagatt
aaaaaggattacctgtctggtgtaggagactcgctagacctggttgtcatcggagcctac
tacggcaaaggcaagcggacatctgtctacggcgctttcctgctagcttgctacaacgcc
tcgacagacacttacgaaacggtctgcaacattggcactggcttctcagaacaagtcctc
gaggatctttacgctcagctctcccaaatcacaatcagccgccccaaacccttctactcg
cactcttcaggcggccagcaccagccggacgtctggtttgagccaaagtacgtgtgggag
gtgaagacggccgacttgacgctcagcccgcggtacaaggctggctggaaggagggagtg
gacccagcgggcgaaaagggcatcagcttgcggttcccgcgattcatcaagattcgagac
gacaagaagccggatgaggcgacgagcagcaggcaggttgcggagatgtacaggaagcaa
gagagtgtgacgaagaataaggggccgtcggtggatgacgactttgagtattga

DBGET integrated database retrieval system