Trichomycterus rosablanca: 134300299
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Entry
134300299 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134300299
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134300299
BRITE hierarchy
Motif
Pfam:
SPRY
zf-B_box
PRY
Motif
Other DBs
NCBI-GeneID:
134300299
NCBI-ProteinID:
XP_062841089
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All DBs
Position
22:4800610..4805938
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AA seq
568 aa
AA seq
DB search
MIVSDDDQINCDICEEGRELLAVKTCVTCLASFCSVHLTSHEKSQVLSKHCLCAPVGNIK
DLLCKKHNKVLELFCMIHRAAICWQCTAKHRNCKTCSVEEMRNDWKAAIDPVEIEVESRE
YATDEALETLETLSEGIKDAAGKMMEDVRDCYETLKNTIEQAQNRVIAFIEKERVEALQQ
IDNQKERLDNHKVTLSNIKEKIAECRSNDSYFNFCLILPVLPPEVGQLEDVQMDGHSVEI
MIQDLQHLNSSLESQLSAMFQRREELRDKYLESDDFRVVSGHSKRRRYLLKYSSKVTFDP
VSASASLLFSEDGLAVTVDHSGLFTWKDYQVNPDLGFRVLCSQEFTMGKHYWEVLPPKDM
NCNWAVGVTYKNGQALYQSLGQDKSSWCVIWHNKEKDKVKDEISNELKDVSVVTQAKEGA
AELEDQKLETETSQEESHLKISREQKLGHQEKGNQTQMSETMPAKKGEDENVADEEKMKE
NLEEKEKEITVKTSTGFFASHNEEMHLISQELPKKIGVLLDCDQGWLFFFLASDSKVKLC
YKFQALFSAPLCPAIWLREPEKTMRINL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgattgtttctgatgatgatcagatcaactgtgacatctgtgaggaggggcgtgagctg
ttggcagtcaagacctgtgtgacgtgcctggctagcttttgcagtgtgcatttaacatcc
catgaaaaaagccaggtgctgagcaaacactgcctgtgcgcaccagttgggaacatcaag
gacttgctatgcaagaagcacaacaaagtgctggagttgttctgcatgatccacagggcc
gccatctgttggcagtgtacagcaaagcaccgcaactgcaaaacatgctcagtggaggaa
atgaggaatgactggaaggctgctattgatccagtggaaatagaggttgagagccgagaa
tatgcaactgatgaagctttggaaactttagaaactctgtcagagggaataaaggatgct
gcaggaaagatgatggaggatgtgcgggactgctacgagactctaaaaaataccattgag
caggctcagaatagagtcatagcctttatagagaaagagagggttgaagcacttcaacaa
atagacaatcagaaggaacggctggataatcataaagtcaccttgtcaaatatcaaagaa
aagatcgctgaatgtagaagcaatgactcttacttcaacttctgtctgatcttgccagta
ctacctccagaggtaggtcagctagaggatgttcagatggatggtcattctgtagagata
atgatccaggaccttcaacacctgaacagtagtctggaatctcagctctccgccatgttt
caaagaagagaagaactgcgagacaaatatttggaatcggatgacttcagagttgttagc
ggacacagcaaacgacgacgttaccttttgaagtattccagcaaggtgacatttgatcct
gtgagtgctagtgcttcactcttgttctctgaggatggcctggctgtcacagttgatcat
agtggacttttcacctggaaagactaccaggtcaacccagatttaggctttagggtgctg
tgctctcaggagttcaccatggggaaacactactgggaggttttgcctcctaaggacatg
aactgcaactgggctgtgggtgtgacatataaaaatggacaggctctgtaccagagcttg
ggccaggacaaaagctcctggtgtgtgatatggcataacaaagaaaaggacaaggttaag
gacgagattagtaatgaattgaaagatgtatcagtagtgacacaggctaaagaaggagct
gcagaacttgaagatcagaagttggaaacagaaacgagccaagaggaatcccatcttaaa
atatccagggagcaaaagctggggcatcaagagaagggaaatcaaacccaaatgtctgaa
accatgcctgcaaaaaagggtgaagatgaaaatgtggcagatgaagaaaagatgaaagaa
aatttggaggagaaagaaaaagaaattacagttaaaaccagcactggattctttgcctcc
cataatgaggagatgcatctgatatcccaggagcttcctaaaaaaattggtgtgctcctt
gactgcgatcaagggtggctgttcttctttttagcatcagattctaaagttaagctttgc
tataagtttcaggccctgttttctgcaccactctgccctgcaatctggctaagagagcca
gagaagacaatgagaattaatctttga
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