Trichomycterus rosablanca: 134306672
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Entry
134306672 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134306672
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134306672
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
Prok-RING_4
Zn_ribbon_SprT
U-box
DUF4407
REST_helical
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
134306672
NCBI-ProteinID:
XP_062846443
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MAESKISVTQDEFSCSVCLETLNDPAAIPCGHSFCMVCINNCWDQEDDKGTYSCPQCRQT
FTPRPVVRRNTMLAGVVEKLKKTELQAPHSAHCSAGPEVVDCDSCTGKKYKAVKSCLVCL
ASFCETHLQPHYQIPSYKKHKLVEASRRLQDQICSQHDKLLEVYCRTDHQCICTLCMLDN
HKGHETISAAAERTEKQKQLLEIQRKFQEKIQNREKELCELINAVESHKCSAQTAVKNIE
RICTELINSINRRCSELKDLIRDRETAGVSQAEKVLKQVEQKIVELKRKDAELQQLSHSE
DPVHFLQNFQSLSASAGSAESASITISPFRSFDDVTKSVSQLREKVEEFWKDQCEKIPDE
VKKVRITSPPEPEIREDFLQYFCQFTLDPNTVNKNLRLSEENKVVTWSETSQSYPDHPDR
FHYNSQVVCRESVSGRCYWEVEWSGNVGVYIAVSYKSISRKGHGDECVFGYNDQSWSLFC
SPSRFSFRHNNKNTEILIKPSSSRIGVYVDYEAGTLSFYSVSDTMKLLHRVQTTFTQLLY
PGFRFGLGSKVKLQQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcaaaaatttcagtaactcaggacgagttcagctgttcagtctgtctggaa
acactgaatgatccagctgctattccatgtggacacagtttctgtatggtgtgtattaat
aactgctgggatcaggaggacgataagggaacatacagctgtccacagtgtagacaaacc
ttcactccaagacctgttgtgaggagaaacaccatgctggctggagttgtggagaaactg
aagaaaacagaacttcaagctccacattctgctcactgttctgctggacctgaagttgtt
gattgtgattcctgcactggaaaaaaatacaaagctgttaaatcctgtctggtgtgtttg
gcctctttctgtgaaactcaccttcagcctcattatcaaattccttcttataagaagcac
aagctggttgaagcctccagacgactccaggatcagatctgctctcagcatgataaactg
ctggaggtttactgtcgtactgatcatcagtgtatctgcacgttgtgtatgctagacaat
cataaaggacatgaaacaatatcagctgcagcagaaagaactgagaaacagaagcagctg
ctggagatccagagaaaattccaggagaaaatccagaacagagagaaggaactttgtgag
ctgataaatgcggtggagtctcacaagtgttctgcacagacagcagtgaagaacattgag
aggatctgtactgaactaatcaactcaattaacagaagatgctctgagctaaaagatctg
atcagagatcgagagacggcaggagtaagtcaagctgaaaaagtcctgaaacaggtggag
cagaagattgtagagctgaagaggaaagatgctgaactgcaacagctctcacactctgag
gatcccgtccatttcctccagaattttcaatctctctcggcttctgctggatctgcagaa
tcagcctccatcacaatcagtcctttccgctcatttgatgatgttacaaagtctgtatct
cagctgagagagaaagtagaagaattctggaaagatcagtgtgagaagataccagatgaa
gtgaagaaagtccggattacttcacctcctgaacctgaaatcagagaagattttctacaa
tatttttgtcagttcacactggatccaaacacagtaaataaaaaccttcgtctgtctgag
gagaacaaagtggtgacctggagtgaaacatcacagtcatatcctgatcatccagataga
tttcattataactctcaggttgtgtgtagagagagtgtgagtggacgctgttactgggag
gttgagtggagtgggaatgttggggtttatatagcagtgtcatataaaagcatcagcagg
aagggacatggtgatgagtgtgtgtttggatataatgatcagtcctggagtttgttctgt
tctccatccagattttcattcagacacaataacaaaaatactgaaattcttataaagccg
agttcctctagaataggagtgtatgtggattatgaagcaggaactctgtctttctacagc
gtctctgatacaatgaagctcctccacagagttcagaccacgttcactcagctcctctac
ccggggtttagatttggtttaggatcaaaagtgaaactgcagcagtga
DBGET
integrated database retrieval system
