Trichomycterus rosablanca: 134310251
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Entry
134310251 CDS
T09921
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like
KO
K14946
RNA binding protein fox-1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134310251 (rbfox1l)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134310251 (rbfox1l)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
134310251
NCBI-ProteinID:
XP_062847870
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All DBs
Position
3:7939030..7953008
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AA seq
379 aa
AA seq
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MLSSPTVILQPYGLPIYPQASCYPSLVQGAPAQEAGPGSGDPVLPQVYAAPPSYPPPGQA
PLTPATRLPPLDFSSAHSSSDYPEHHQLLVYPSAQHEGAESLPANTTDEGLASVTSDSQP
LSVSVATVGGAGSGGEDDGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGTILDVEIIFN
ERGSKGFGFVTFENAAEADQAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNATGWK
INPMMGAMYASELYTVASFPYPVPTAALAYRGATLRGRGRAVYNTIRSAAAAATPTAVPA
YPGVVYQDGLYGTEVYGGYPAAYRVAQSPSAAATAAYSDGYGRVYATDPYHHSVGPTTTY
GVGTMASLYRGGYNRFTPY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcctctcctactgtcatcctgcagccttacggactgcccatctacccacaggcc
tcctgctaccccagcctggtgcagggtgctcctgcccaggaagcagggccaggcagtggt
gatccggtcctccctcaggtttatgctgcacctccttcatacccaccaccaggacaagcc
ccactcacacctgctaccagactcccacctttagattttagctccgcccactccagctct
gattaccccgagcaccatcagctactagtgtatccaagtgcacagcatgagggggcagag
tctttaccagctaataccacggatgaaggtctggcttctgtgacctctgactcacagcca
ctgagtgtatctgttgcaacagtgggcggagcaggaagtggtggcgaggatgatgggtct
ggaaaggctcaacccaaacgccttcacgtctccaatattcccttcagattccgtgacccg
gatctgaggcaaatgtttgggcaatttggtacaattctggatgtcgaaatcatttttaat
gagagagggtcaaagggttttgggtttgtgacatttgagaatgcagctgaagctgatcaa
gctcgtgagaaactcaacgggaccatcgtagaagggagaaaaatcgaggtaaataacgcc
acagccagagtggtaacaaagaaaccacagactccccttgttaacgctacaggatggaag
attaaccccatgatgggggcgatgtacgcttctgaactctacaccgttgccagttttccg
tatcctgttcccacggcagctttggcttatagaggcgctaccttaagagggcgtggtcgt
gctgtgtataatacaattcgctcagctgctgcagcagccacgcccactgctgttccagcc
tatccaggggtggtgtatcaggatggcctgtatggaactgaagtttatggaggatacccc
gcagcgtaccgagtggctcagtctccttcagctgcagctacagccgcttacagtgacggg
tacggacgagtatatgcgactgatccctatcatcactcagtcggtccaaccaccacatat
ggagtcggcaccatggccagtttgtatagaggaggctacaaccgcttcactccatactga
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