Trichomycterus rosablanca: 134311993
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Entry
134311993 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134311993
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134311993
BRITE hierarchy
Motif
Pfam:
SPRY
PRY
zf-B_box
SHE3
KxDL
Med4
GvpL_GvpF
Bles03
Motif
Other DBs
NCBI-GeneID:
134311993
NCBI-ProteinID:
XP_062849711
LinkDB
All DBs
Position
4:51033338..51057846
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AA seq
416 aa
AA seq
DB search
MSGSVKSCLVCLASYCETHLQPHYESPAFKKHKLVKASRRLQEQICSQHDKLLEVYCRTD
QQCICMLCIMDDHKGHDTISAAGERTEKQKKLEKLHKESQQRLQNREEEIQKLRKAVKSH
KSSAQTTVKNIERICTELISSIRRRCSEVTQLIRDQEKAAVSQAEILIKRYQEETFQSHL
VSAGPAESPAITLNPLLTYNSVTKSMSQLREKLEDFCKDENKKISGGVRKIWIISSPEPQ
TRREFLQYFCQFTLDPNTVNKHVLLSEENKVVSYSETEQLYPDRFDFYTQVLCRESVSGR
CYWEVEWSGNDGVYIAVSYKSISRKGRGDECWFGWNDQSWILFCSTSRFSFWHNNKGTEI
PIMPSSSRIGVYVDYRAGALSFYSVSDTMKLLFRVQTTFTKPLYPGFSVCKGAQWI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctctgttaaatcctgtctggtgtgtttggcttcttactgtgaaactcacctc
cagcctcactatgaatctcctgcttttaagaagcacaagctggttaaagcctccagacga
ctccaggagcagatctgctctcagcatgataaactgctggaggtttactgtcgtactgat
cagcagtgtatctgcatgttgtgcatcatggatgatcataaaggacatgatacaatatca
gctgcaggagaaagaactgaaaaacagaagaagttggagaagttgcataaagaatcacag
cagagactccagaacagagaggaggagattcagaagctgagaaaagctgtgaagtctcac
aagagctctgcacagacaacagtgaagaacattgagaggatctgtactgaactgatcagc
tccattaggagaagatgctctgaagttacacaactgatcagagatcaggagaaagctgca
gtgagtcaagctgaaatattaatcaaaagatatcaggaggagacattccagtcacatttg
gtctctgctggacctgcagaatcaccagccattacattaaatcctctactcacttacaat
agtgttacaaagtccatgtctcagctcagagagaaactagaagacttttgtaaagacgag
aacaagaagatatcaggaggagtgagaaaaatctggataatttcttcacctgaaccacaa
accagacgagagtttctacaatatttctgtcagttcacactggatccaaacacagtaaat
aaacacgtccttctgtctgaggagaacaaagtggtgagctacagtgaaacagaacagttg
tatccagatagatttgatttttacactcaggttctgtgtagagagagtgtgagtggacgc
tgttactgggaggttgagtggagtgggaatgatggggtttatattgcagtgtcatataaa
agcatcagcaggaagggacgtggtgatgagtgttggtttggatggaatgatcagtcctgg
attttgttctgttctacatcgagattttcattctggcacaataacaaaggaactgaaatt
cccataatgccgagttcctctagaataggagtgtatgtggattacagagcaggagctctg
tccttctacagcgtctctgatacaatgaagcttctcttcagagttcagaccacattcact
aagccactctacccggggttttcggtttgtaaaggtgctcagtggatctag
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