Trichomycterus rosablanca: 134312478
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Entry
134312478 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134312478
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134312478
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-ANAPC11
EzrA
DUF4407
zf-Nse
Mt_ATP-synt_D
ApoLp-III
Exonuc_VII_L
LMBR1
Motif
Other DBs
NCBI-GeneID:
134312478
NCBI-ProteinID:
XP_062850531
LinkDB
All DBs
Position
4:50935429..50943490
Genome browser
AA seq
552 aa
AA seq
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MAEANISVAQDQFSCPVCLELLKNPVSTPCGHSFCMVCINKCWDQEDDKGTYSCPHCRQT
FTPRPVLRKNTILADVVEKLKKTELQASQLIQCSAGPEDVECDVCTGRKNKAVKSCLASF
CETHLQPHYQIPAYKKHKLVKASRRLQDQICPQHDKLLEVYCHTDQQCICMLSMLDEHKG
HDTISAAAERTEKQVKLEEMQRESQQRIQNGEDEIQKLRKAVESHRRSAQTAVENIEKIF
TELINSIKKRCSEVTELIRGQEKAAVSQAEEFMKQLQQEIVELKRRNAELEELSHSEDFF
QTFPSYLTPAGPAESPTITLNPLLTYEGVTKSMSELREKLEEFCKDENKKISDGVRKIWI
ISSPEPQTRREFLQYFCQFTLDPNTVNKNLRLSEENKVVTCSGTDQWYHDHPDRFNYSHP
VLCRESVSGRCYWEVEWSGNDGVYIAVSYKSVSRKGRGDECWFGCNDQSWSLFLSPSRFS
FLHDNKRTKIPIMPSSSRIGVYVDYRAGTLSFYSVSDTMKLLHRVQATFTQLLYPGFLVC
KGSTVNCHPETR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcaaatatttcagtagctcaggaccagttcagctgtccagtctgtctggag
ttactgaagaatccagtatctacaccatgtggacacagtttctgtatggtgtgtatcaac
aagtgctgggatcaggaggatgataagggaacatacagctgtccacattgtagacaaacc
ttcactccaagacctgtcctgaggaaaaacaccattctggctgacgttgtggaaaaactg
aagaaaacagaacttcaagcttcacaattgattcaatgttctgctggacctgaagatgtg
gagtgtgatgtctgtactgggagaaaaaacaaagcagtaaaatcctgtttggcctctttc
tgtgaaactcacctccagcctcactatcaaattcctgcttataagaagcacaagctggtt
aaagcctccagacgactccaggatcagatctgccctcagcatgataaactgctggaggtt
tactgtcatactgatcagcagtgtatctgcatgttgagtatgctagatgaacataaagga
catgatacaatatcagctgcagcagaaagaaccgagaaacaggtaaaattggaggagatg
cagagagaatcgcagcagagaatccagaacggagaggatgagattcagaagctgagaaaa
gctgtggagtctcacaggcgctctgcacagacagcagtggagaacattgagaagattttt
actgaactaatcaactccattaagaaaagatgttctgaagttacagaactgatcagaggt
caggagaaagctgcagtgagtcaagctgaagaattcatgaagcaactgcagcaggagatt
gtagagctaaagcggagaaatgctgaactggaggagctttcacacagtgaagatttcttc
cagacttttccatcttatttgacccctgctgggcctgcagaatcacccaccatcacatta
aatcctctactcacttacgagggtgtaacaaagtccatgtctgagctcagagagaaacta
gaagaattttgtaaagacgagaataagaagatatcagatggagtgagaaagatctggatc
atttcttcacctgaaccacaaaccagacgagagtttctacaatatttctgtcagttcaca
ctggatccaaacacagtaaataaaaacctccgtttgtctgaggagaacaaagtggtgacc
tgcagtggaacagaccagtggtatcatgatcatccagatagatttaattattcacacccg
gttctgtgtagagagagtgtgagtggacgctgttactgggaggttgagtggagtgggaat
gatggggtttatatagcagtgtcatataaaagcgtcagcaggaagggacgtggtgatgag
tgttggtttggatgtaatgatcagtcctggagtttgttcctttctccatccagattttca
ttcctgcacgataacaaaagaacgaaaattcccataatgccgagttcctctagaatagga
gtgtatgtggattacagagcaggaactctgtccttctacagcgtctctgatacgatgaag
ctcctccacagagttcaggccacgttcactcagctcctctacccggggtttttggtttgt
aaagggtcaacagtgaactgtcatcctgaaactagataa
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