Trichomycterus rosablanca: 134312487
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Entry
134312487 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134312487
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134312487
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
zf-Nse
ApoLp-III
Spc29
Trimer_CC
EzrA
HSP70
Motif
Other DBs
NCBI-GeneID:
134312487
NCBI-ProteinID:
XP_062850543
LinkDB
All DBs
Position
4:51061174..51068290
Genome browser
AA seq
555 aa
AA seq
DB search
MAEANISVAQDQFSCPICLELLKDPVAVPCGHSFCMVCISNCWDQEDDKGTYSCPQCRET
FTPRPVLSKNTILSEVVEKLKKTELQAPQPAHCFAGPEDVECDVCTGKKHKAVKSCLVCL
ASYCETHLQPHYESLAFKKHKLVKASRRLQEQICSQHDKLLEVYCRTDQQCICMLCTMDD
HKGHDTISAAAEKTEKQKKLEEIQRESQKRIQNREKEIQKLRKAVESHRSSAQTAVENIE
RISTELISSIKRRCSEVTELIRDQEKAAVSQAEEFMKQLQQEIEELQRRNAELEELSHSE
DPIHFLQTFQSHLVSAGPAESPTIKLNPLITYKGVTKSMSELREKLEEFCKEENEKISCG
VRKIWMISSPEPQTRREFLQYFCQFTLDPNTVNKHLRLSEKNKVVTCSGTLQSYPDHPDR
FDYYSQALCRESVSGRCYWEVEWSGNIGVSIAVSYKSISRKEVANKCVFGWNDHSWSLFC
SQSRFSFWHNSKGNEIPIMQSSTRIGVYVDYRAGTLSFYNVSDTMKLLFRVQTTFTQLLY
PGFLVCNGSTVKLSS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcaaatatttcagtcgctcaggaccagttcagctgtccaatctgtctggaa
ctactgaaggatccagttgctgttccatgtggacacagtttctgtatggtgtgtatcagc
aactgctgggatcaggaggatgataagggaacatacagctgtccacaatgtagagaaacc
ttcactccaagacctgtcttgagtaaaaacaccattctgtctgaagttgtggagaaactg
aagaaaacagaacttcaagctccacaacctgctcactgttttgctggacctgaagatgtg
gagtgtgatgtctgtactggaaaaaaacacaaagctgttaaatcctgtctggtgtgtttg
gcctcttactgtgaaactcacctccagcctcactatgaatctcttgcttttaagaagcac
aagctggttaaagcctccagacgactccaggagcagatctgctctcagcatgataaactg
ctggaggtttactgtcgtactgatcagcagtgtatctgcatgttgtgcaccatggatgat
cataaaggacatgatacaatatcagctgcagcagaaaaaactgagaaacagaagaagttg
gaggagatacagagagaatcacagaagagaatccagaacagagagaaggagattcagaag
ctgagaaaagctgtggagtctcacaggagctctgcacagacagcagtggagaacattgag
agaatctctactgaactgatcagctccattaagagaagatgctctgaagttacagaacta
atcagagatcaggagaaagctgcagtgagtcaagctgaagaattcatgaagcaactgcag
caagagattgaggagttacagaggagaaatgctgaactggaggagctttcacacagtgaa
gatcccatccatttcctccagactttccagtctcatttggtctctgctggtcctgcagaa
tcacccaccatcaaattaaatcctctaatcacttacaagggtgtaacaaagtccatgtct
gagctcagagagaaactagaggaattttgtaaagaggagaatgagaagatatcatgtgga
gtgagaaaaatctggatgatttcttcacctgaaccacaaaccagacgagagtttctacaa
tatttctgtcagttcacactggatccaaacacagtaaataaacacctccgtctgtctgag
aagaacaaagtggtgacctgcagtggaacattacagtcgtatcctgatcatccagataga
tttgattattactcccaggctctgtgtagagagagtgtgagtggacgctgttactgggag
gtggagtggagtgggaatattggggtttctatagcagtgtcatataaaagcatcagcagg
aaggaagttgctaataagtgtgtgtttggatggaatgatcattcttggagtttgttctgt
tctcaatccagattttcattctggcacaatagtaaaggaaatgaaattcccataatgcag
agttctactagaataggagtgtatgtggattacagagcaggaactctgtccttctacaac
gtctctgatacaatgaagcttctcttcagagttcagaccacgttcactcagctcctctac
ccggggtttttggtttgtaatgggtcgacagtgaaactgtcatcctga
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