Trichomycterus rosablanca: 134312488
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Entry
134312488 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134312488
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134312488
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-RING_10
U-box
EH_Signature
zf-RING_6
TRAF3_RING
Prefoldin_3
Y1_Tnp
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
134312488
NCBI-ProteinID:
XP_062850544
LinkDB
All DBs
Position
4:complement(51517038..51556818)
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AA seq
548 aa
AA seq
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MANISVSQDQFSCSICLELLNDPVTTSCGHSFCMVCINNCWDQEDNKGTYSCPQCTKTFT
PRPAVSKNIILCGVVENLKKTEQDYAHCSAGPEDVGCDFCTGRKYKAVKSCLVCLASYCE
THIQPHYESPAFKKHKLVKVSRRLQEQICSRHNKPLEVYCFTDQQCICMLCIMDDHKGHD
TILATAERTEKQLLEIQRKFQEKNQNREKELNKLINAVESHKRSAQTAVENIERICTELI
DSINRRCFWMKDLIRHREKAKVSQAEKTIKQIKKEIVDFRKKDAELEQLSHTEDFIHFLQ
SLSTPAGSAESTAITISPYLSFDDVTKSVSQLREKVEEFWKEQFEKITDEVKDVQIISPP
EPETREDFLRYFRQFTMDPNTVNKNLHLSEENKVATRSGKEHLYPDHPERFNHYSQVLCR
ESVSGRCYWEVEWSGNNGAYILVSYKSIRRKGSDDECVFGWNDVSWCLEISPSTFLFWHK
HKETKIAFNLSSSRIGVYVDYKAGTLSFYSISDTMKLLHRVQTKFTELLYPGIWVGIGSK
AKLLDSTN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatatttcagtatctcaggatcagttcagctgttcaatttgtctggaactactg
aatgatccagtaactacatcatgtggacacagtttctgtatggtgtgtatcaataactgc
tgggatcaggaggataataagggaacatacagctgtccacagtgtacaaagaccttcact
ccaagacctgctgtgagtaaaaacatcattctatgtggagttgtggagaacttgaagaaa
acagaacaagattatgctcactgttctgctggacctgaagatgtggggtgtgatttctgt
actgggagaaaatacaaagcagtaaaatcctgtctggtgtgtttggcctcttactgtgaa
actcacattcagcctcactatgaatctcctgcttttaagaagcacaagctggttaaagtc
tccagacgactgcaggagcagatctgctctcggcataataaaccgctggaggtttactgt
tttactgatcagcagtgtatctgcatgttgtgcatcatggatgatcataaaggacatgat
acaatattagctacagcagaaagaactgagaaacagcttctggagatccagagaaaattc
caggagaaaaaccagaacagagagaaggaacttaataagctgataaacgctgtagagtct
cacaagcgttctgcacagacagcagtggagaacattgagaggatctgtactgaactgatc
gactcaattaacagaagatgtttttggatgaaagatctgatcagacatcgagagaaagct
aaagtaagtcaagctgaaaaaaccataaagcagataaagaaggagattgtagatttcagg
aagaaagatgctgaactggagcagctttcacacacagaggatttcatccatttcctccag
tctctctcgactcctgctggatctgcagaatcaaccgccatcacaatcagtccttacctc
tcatttgatgatgttacaaagtctgtatctcagctgagagagaaagtagaagaattctgg
aaagagcagtttgagaagataacggatgaagtgaaggacgttcagatcatttcaccacct
gaacctgaaaccagagaagattttctacgatatttccgtcagttcacaatggatccaaac
acagtaaataaaaacctccatctgtctgaggagaacaaagtagcgaccaggagtggaaaa
gaacacttgtatcctgatcatccagaaagatttaatcattactctcaggttctgtgtaga
gagagtgtgagtggacgctgttactgggaggtcgagtggagtggaaataatggggcctat
atactggtgtcatataaaagcatcagaaggaagggaagtgatgatgagtgtgtgtttgga
tggaatgatgtgtcctggtgtttagagatttcaccatccacctttttattctggcacaaa
cacaaagagactaaaattgccttcaatctgagttcctctagaataggagtgtatgtggat
tacaaagcaggaactctgtctttctacagcatctctgatacaatgaagctcctccacaga
gttcagaccaagttcactgagctcctctacccggggatttgggttggtataggatcaaaa
gcaaaactgttagattcaacaaattaa
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integrated database retrieval system
