Trichomycterus rosablanca: 134317099
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Entry
134317099 CDS
T09921
Symbol
rbfox2
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134317099 (rbfox2)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134317099 (rbfox2)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
DUF3182
RRM_5
Motif
Other DBs
NCBI-GeneID:
134317099
NCBI-ProteinID:
XP_062853865
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All DBs
Position
6:38047481..38127641
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AA seq
463 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLMERDNRDLETNTNQVQQTQNQSPNPVRGMKRGDPEPDPHGQA
AAPLGDSVGAECKRPRIDGGADIGQNNDPLNMAFHGYPSSSQGSQEAMGAQDGLVPPPYS
SFPPPPPPPPQNGLPLDYGGSSIYPAGGQGQVEATAGISNPPSTQSTLNTQQLSDGSPQT
EQQCVSGGGSGLSGTEDSSDSKLTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFENSSDAEKARERLHGTIVEGRKIEVNNATARVMTNKKLVSPYANGEGL
NALPYVAGWKLSPMVGAMYGPELYAVPGFPYPTVAAAAAATTAATIRGAHLRGRGRPVYG
AVRAAIPQPTIQAYPGVVYQDGFYGPADLYGGYAAYRYAQPAAVAGPTAAAAAAAAAAYS
DSYGRVYAADPYATALATPAAAAYQVGAMATLYRGGYSRFSPY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcgtccatcatgctgcccgttagtcggggactgatggag
cgggacaaccgggacttggagacgaacaccaaccaggttcagcagacacagaaccaaagc
ccgaacccggtgcgagggatgaagcgtggagacccagaaccggacccgcacggacaggct
gctgcgcctcttggggactccgtcggggctgagtgcaagagaccccgcatagacggcggt
gcagacataggccagaacaatgatccattgaacatggccttccacggatacccctcatct
agtcagggttcacaggaggcgatgggggctcaggatggcctcgtcccccctccgtactca
tccttcccccctccgccaccacctccgcctcagaacggtctgccgctggactacggaggc
agcagtatttacccggcaggggggcagggacaagtagaggcgacagcggggatcagcaac
cccccctcaactcagagcactctcaacacacaacagctatcagacggctccccccagacc
gagcagcagtgcgtatctggtggaggttcagggctttctggaaccgaagactcctcagac
agcaagctgaccccaaaacgtctccacgtctccaacatccctttccgtttccgagacccc
gacctgcgccagatgttcgggcaattcgggaagatcctggatgtcgagatcattttcaat
gagagaggctctaaggggttcggcttcgtgacttttgagaacagctcagacgcagagaag
gcccgggagagactacacgggacgatagtggagggcaggaagattgaagtaaacaacgct
acagctcgagtcatgaccaataagaagctggtcagtccatatgctaacggagaaggactc
aacgctctaccttatgtagctgggtggaagctgagccccatggttggagcaatgtatgga
ccggagctttacgcagttccagggttcccgtaccctacagtggcggcagcggcagcagcc
actacagccgctactattaggggcgctcacctgcggggtcgaggtcgtccagtgtatggt
gctgtacgtgcagccattccacaacccaccattcaagcatatccaggcgtggtgtaccag
gacggtttctatgggccggcagatctctatggaggctatgccgcatatcgctacgcccaa
ccagccgccgtagccggaccaacagcagcagcagcggcggccgctgcagcagcctacagt
gacagttatggtcgtgtgtatgcagccgatccctacgctacagcactagcaacccctgca
gctgctgcgtaccaagtgggagcaatggccaccctttataggggaggatacagcaggttt
tctccttactga
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