Trichomycterus rosablanca: 134320435
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Entry
134320435 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134320435
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134320435
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_5
zf-RING_6
U-box
CASP_C
Motif
Other DBs
NCBI-GeneID:
134320435
NCBI-ProteinID:
XP_062857888
LinkDB
All DBs
Position
9:complement(8383074..8387417)
Genome browser
AA seq
555 aa
AA seq
DB search
MAEATISVDHDQFGCPVCLDLLKDPVTTSCGHSFCSLCINSCWDQEDVSGVYSCPQCRET
LTPRPVLRRNNMLAEVVEKLKRTDAQTASSSPCYAEPEDVDCDFCTGKKHKAIKSCLVCM
VSLCETHVKPHLELPALKKHTLVEVFSKLEEKLCSHHDKLMEIYCRTDQSCICYLCMLDK
HKGHDTVSAEAERDKKQCEIKETQAKFQKKIQEKEKKVQELKQAINTIKISAQSTVDNTE
KIFTELISSMEKKRLEVTAQIRDREKAELSQTEQILQQLEQEIADLRRKVTELEELSKTH
DHIHFLQSFQSLSLSSGCKDSPIISVNQHPMFDRVRESVSCLKRQFEEFSKEKFIEISKN
AAAVRITLPSEPKSREDFLQYFCELTLDPYTAHSNLILSEKNKVVVCSEGQQRYLDHPER
FDSRFQVLCKERMCGHSYWEVEWSSKVYISVSYEGIGRKGGGYNCTFGCNCQSWSLECTS
SSLSFWHNNIKTKLTIPSSPRIGVFVDHSAGILSFFSVSDTMELLHRVQTTFTQPLYAGL
RLSMIGSTVRLCDPK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcaacgatttcagtagaccatgaccagttcggctgtccagtctgtctggat
ctactgaaggatccagtgacgacatcctgtggtcacagtttctgttcgttatgtattaat
agttgctgggatcaagaagatgtgagtggagtttacagctgtccacagtgcagagagact
ttgactcccaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactc
aagaggacggatgcccaaacagcttcttcttctccttgttatgctgaacctgaagatgtg
gactgtgatttttgcaccggtaaaaaacacaaagccatcaagtcctgtctggtgtgtatg
gtttctctttgtgaaactcatgtgaaacctcatcttgaactacctgcactgaaaaaacac
acattagtcgaagtcttttcaaaactagaagaaaagctctgctcacatcatgacaaactg
atggagatctactgtcgtactgaccaaagctgcatctgttatttgtgtatgctggataaa
cataaagggcatgatacagtctcggctgaggcagaaagagacaaaaaacagtgtgagata
aaggagacacaggcgaaattccagaagaaaatccaggagaaggagaagaaggtgcaggag
ctgaaacaggctataaacactattaagattagtgcacagtcaacagtggacaacacagag
aaaatctttactgagctgattagctccatggagaaaaagcgtttggaggtgacagcacag
atccgagatcgggagaaggctgaactgagtcagactgaacaaatcctgcagcagctggag
caggagattgctgatcttaggaggaaagtcactgaactagaggagctttcaaaaacacat
gatcacatccattttctccagagtttccagtctctctctctctcttctggatgtaaggac
tcacccatcatcagtgtcaatcaacatcccatgtttgatagagtaagggaatccgtctct
tgtctaaaaaggcaatttgaggaattcagcaaagagaaattcatcgaaatatctaaaaat
gctgctgcagttcggattacattaccctcagaaccaaaaagcagagaagattttcttcaa
tatttctgtgagttgaccttggatccttacacagcccacagtaaccttattctgtctgag
aagaacaaagtagtggtgtgcagtgaaggacagcagcgatacttggatcatccagagaga
tttgacagtcgatttcaggtgttgtgtaaggagaggatgtgcggacattcttactgggag
gtggagtggagcagcaaagtgtacatatcagtttcctacgaagggattggcagaaaagga
ggaggttacaattgtacatttggatgcaactgtcagtcctggagcctggagtgtacttcc
tcctctctcagtttttggcacaacaacattaagactaagcttacaattccatcatccccc
agaataggagtgtttgtggatcacagtgcaggaattttgtccttctttagtgtctctgac
acaatggagcttctccacagagtccaaaccacatttactcagcccctctatgctggctta
cgcctatctatgattggatcaactgtaaggttatgtgatcccaaataa
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integrated database retrieval system
