Trichomycterus rosablanca: 134321854
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Entry
134321854 CDS
T09921
Symbol
rbfox3a
Name
(RefSeq) RNA binding protein fox-1 homolog 3
KO
K14946
RNA binding protein fox-1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134321854 (rbfox3a)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134321854 (rbfox3a)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
134321854
NCBI-ProteinID:
XP_062859765
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All DBs
Position
10:complement(23182473..23881593)
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AA seq
386 aa
AA seq
DB search
METQSWAETKPGNGLFKTGNIALFGNVVYSGLLNDHFWHFGVPLVTRLGNQEAPAPPEAM
AQPYAPAQYPPPPPQNGLPGEYAHPGQEYTGPNPVPEHAAALTIYTTTQTHSDPTGTDSN
TPSLTAPNSLPADDVAQTEASQQLQLQPSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFGQ
FGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTNK
KVANPYTNGWKLNPVVGAVYGPEFYAVTGFPYPTTGATVAYRGAHLRGRGRAVYNTFRAA
PPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPAAAAAAAYSDSYGRVYATADPYHHT
IGPAATYSVGTMASLYRGGYSRFTPY
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagacccagagctgggcagaaactaaaccaggaaacgggctgtttaaaaccggaaac
attgctctcttcggaaacgtagtgtacagtgggctgctgaacgatcacttctggcacttt
ggggttccccttgtcacaagactgggtaaccaggaggcaccagcccctccagaggccatg
gctcagccatacgcaccagcgcagtaccctcctcctccgcctcagaacgggctgcccggc
gagtacgcccaccctggccaggagtacacgggcccaaacccagtgcccgagcatgcagcc
gccctcaccatctatacaaccacacagacacacagtgatccaactggcactgacagcaac
acaccctctctcacagcacccaacagtttaccagcagatgatgtggcgcagacagaggca
tcccagcagctccagctccagccctcagactcttcagagaagcagcagcccaagcggtta
cacgtctccaacattcctttccgcttccgtgacccagatctccgacaaatgtttgggcaa
tttgggaaaattttagatgtggaaattatttttaacgagcggggctctaagggtttcggt
tttgtaacttttgaaacgagtgcagatgcagaccgtgcacgggagaaacttaatggtaca
atcgtagagggacgcaaaatcgaggtaaacaatgcaacagcgagagtaatgacaaacaag
aaagtggcaaacccctacacaaatggttggaagctgaatcctgtggtgggcgctgtctat
ggtcctgaattttatgcagttacaggctttccatatccaaccacaggggctacggtggca
tacaggggtgcccatttgaggggtcggggtcgtgcagtctacaatacattccgtgccgca
cccccacctcctcctattcctgcttatggagctgtggtttaccaggacggcttctatggg
gctgagatctatggtggctatgcagcatataggtatgcccagccagccgcagcagctgca
gcagcttacagtgacagctatggcagagtctatgcaacagcagacccctatcaccacacg
attggacccgcagccacgtacagcgtgggcactatggctagcctatacagaggagggtac
agtcgcttcactccatactaa
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