Trichomycterus rosablanca: 134326232
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Entry
134326232 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134326232
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134326232
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Zn_ribbon_SprT
Baculo_PEP_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
134326232
NCBI-ProteinID:
XP_062864480
LinkDB
All DBs
Position
14:24372727..24380755
Genome browser
AA seq
555 aa
AA seq
DB search
MAESKISVAKDEFSCSVCLETLKDPVTILCGHSFCMVCINNCWDQEDDKGTYSCPQCRQT
FTPRPVVRRNTILAGVVEKLKKTELQAPHPGHCSTGPEDVDCDVCIERKYKAVKSCLVCL
ASFCETHLQPHYQIPAYKIHKLVEASRRLQDQICSQHDKMLDVYCRTDQQCICMLCTMDD
HNGHDTISAAAERTEKQKQLLEIQRKFQEKIQNREKELCELINAVKSHKCSAQTAVKNIE
RICTELINSINRRCSELKDLIRDRETAEVSRAEKVLKQVEQQIVELKRKDAELKQLSHTE
DPVHFLQNFQSLSAPAGSAESAAITISPFLSFDDVTKSVSQLREKVEEFWKEQCEKIPDE
VKKVQITSPPEGEIREDFLQYVCRFTLDPNTAHKCLRLSEENKVVTQSKTSQSYPDHPDR
FDYYLQVVCRESVSGRCYWEVEWSGDKWVFITVSYKSISRKGRGDECVFGGNDQSWSLFC
SPSRFSFLHNNKDTKIPIIPSSSRIGVYVDYEAGTLSFYSVSDTMKLLHRVQTTFTQLLY
LGFGVGLGSEVKLSD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtccaaaatttcagtagctaaggacgagttcagctgttcagtctgtctggaa
acactgaaggatccagtaactattctttgtggacacagtttctgtatggtgtgtattaat
aactgctgggatcaggaggatgataagggaacatacagctgtccacagtgtagacaaacc
ttcactccaagacctgttgtgaggagaaacacaattctggctggagttgtggagaaactg
aagaaaacagaacttcaagctccacatcctggtcactgttctactggacctgaagatgtg
gattgtgatgtctgtatagagagaaaatacaaagcagtaaaatcctgtctggtgtgtttg
gcctctttctgtgaaactcaccttcagcctcattatcaaattcctgcttataagattcac
aagctggttgaagcctccagacgactccaggatcagatctgctctcagcatgataaaatg
ttggatgtttactgtcgtactgatcagcagtgtatctgcatgttgtgtaccatggatgat
cataacggacatgatacaatatcagctgcagcagaaagaactgagaaacagaagcagctg
ctggagatccagagaaaattccaggagaaaatccagaacagagagaaggaactttgtgag
ctgataaacgctgtaaagtctcacaagtgttctgcacagacagcagtgaagaacatcgag
aggatctgtactgaactaatcaactcaattaacagaagatgctctgagctaaaagatctg
atcagagatcgagagacagcagaagtaagtcgagctgaaaaagttctgaagcaggtggag
cagcagattgtagagctgaagaggaaagatgctgaactgaaacagctttcacacacagag
gatcccgtccatttcctccagaattttcagtctctctcggctcctgctggatctgcagaa
tcagccgccatcacaatcagtcctttcctctcatttgatgatgttacaaagtctgtatct
cagctgagagagaaagtagaagaattctggaaagagcagtgtgagaagataccagatgaa
gtgaagaaagtccagattacttcacctcctgaaggtgaaatcagagaagattttctacaa
tatgtttgtcggttcacactggatccaaacacagcacataaatgcctccgtctgtctgag
gagaacaaagtggtgacccagagtaaaacatcacagtcgtatcctgatcatccagataga
tttgattattacctccaggttgtgtgtagagagagtgtgagtggacgctgttactgggag
gttgagtggagtggggataagtgggtttttataacagtgtcatataaaagcatcagcagg
aagggacgtggtgatgaatgtgtgtttggaggtaatgatcagtcctggagtttgttctgt
tctccatccagattttcattcctgcacaataacaaagatactaaaattcccataattccg
agttcctctagaataggagtgtatgtggattatgaagcaggaactctgtccttctacagc
gtctctgatacaatgaagctcctccacagagttcagaccacgttcactcagctcctctac
ctagggtttggtgttggtttaggatcagaagtgaaactgtcagat
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