Trichomycterus rosablanca: 134326260
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Entry
134326260 CDS
T09921
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134326260
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134326260
BRITE hierarchy
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
Prok-RING_4
zf-RING_UBOX
zf-UDP
Baculo_PEP_C
U-box
YjeF_N
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
134326260
NCBI-ProteinID:
XP_062864499
LinkDB
All DBs
Position
14:26945154..26956956
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AA seq
546 aa
AA seq
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MAESKISVTQDEFSCSLCLETLKDPVTTSCGAKNCNNCWDQEVDKGTYSCPQCRKTFTPR
PVVSINTMLVGEKLKKTXLQAPHPGHCSAGPEDVECDSCTGKKYKAVKSCLACLASFCET
HLQPHCQIPLYKTHKLVKASRXLQDQICSQHNKLLEVYCRTDQQCICVLCTMDDHKGHDA
ISAAAERTEKQVKILYSSLXQRKFQEKIQNREKELCELIKAVESHKCSAQTAVKNIERIC
TELINSVTRRCFELKDLIRDRETAEVSRAEKLIKRVVQEIEELQKKDAELDTAQSLSAPA
GSAESAAITISPFLSFDDVTTSVSQLREKVEKFWKEQCEKIPDEVKKVRITSPPEPEIRE
DFLQYVCRFTLDPNTVNKNLRLSEENKVATRSRTEQSYHDHPDRFYVYSQVVCRESVSGR
WYWEVEWSGNKGVDIAVSYKSISRKERGDDCRFGQNDQSWRLFCSPSSFSFRHNKKKTEI
PTMPSSSRIGVYVDYEAGTLSFYSVSDTMKLLHRVQTTFTQPLYPGFFLYPGSEVKLARI
HIITQQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatccaaaatttcagtaactcaggacgagttcagctgttcactctgtctggaa
acactgaaggatccagtaactacatcatgtggtgcaaaaaactgtaataactgctgggat
caggaggttgataagggaacatacagctgtccacagtgtagaaaaaccttcactccaaga
cctgttgtgagtataaacacaatgctggttggggagaaactgaagaaaacataacttcaa
gctccacatcctggtcactgttctgctggacctgaagatgtggagtgtgattcctgcact
gggaaaaaatacaaagccgtaaaatcctgtctagcgtgtttggcctctttctgtgaaact
caccttcagcctcattgtcagattcctctttataagactcacaagctggttaaagcctcc
agatgactccaggatcagatctgctctcagcataataaactgctggaggtttactgtcgt
actgatcagcagtgtatctgtgtgttgtgtaccatggatgatcataaaggacatgatgca
atatcagctgcagcagaaagaactgagaaacaggtaaaaatattatacagctctctttaa
caaagaaaattccaggagaaaatccagaacagagagaaggaactttgtgagctgataaaa
gctgtggagtctcacaagtgttctgcacagacagcagtgaagaacattgagaggatctgt
actgaactaatcaactcagttaccagaagatgctttgagctaaaagatctgatcagagat
cgagagacagcagaagtaagtcgagctgaaaaactcataaaacgggtggtgcaggagatt
gaagagctgcagaagaaagatgctgaactggacacagcgcagtctctctcggctcctgct
ggatctgcagaatcagccgccatcacaatcagtcctttcctctcatttgatgatgttaca
acgtctgtatctcagctgagagagaaagtagaaaaattctggaaagagcagtgtgagaag
ataccagatgaagtgaagaaagtccggattacttcacctcctgaacctgaaatcagagaa
gattttctacaatatgtttgtcggttcacactggatccaaacacagtaaataaaaacctc
cgtctgtctgaggagaacaaagtggcgacccggagtagaacagaacagtcgtatcatgat
catccagatagattttatgtttactctcaggttgtgtgtagagagagtgtgagtggacgc
tggtactgggaggttgagtggagtgggaataagggggttgatatagcagtgtcatataaa
agcatcagcaggaaggaacgtggtgatgattgtaggtttggacagaatgatcagtcctgg
aggttgttctgttctccatccagcttttcattccggcacaataagaaaaagactgaaatt
cccacaatgccgagttcctctagaataggagtgtatgtggattatgaagcaggaactctg
tccttctacagcgtctctgatacaatgaagctcctccacagagttcagaccacgttcact
cagcccctctacccggggttttttctttatccaggatcagaagtgaaacttgcaagaatt
cacataattacacagcagtga
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