Trichomycterus rosablanca: 134326308
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Entry
134326308 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134326308
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134326308
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_6
U-box
Prok-RING_4
Baculo_PEP_C
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
134326308
NCBI-ProteinID:
XP_062864529
LinkDB
All DBs
Position
14:complement(32457191..32505856)
Genome browser
AA seq
638 aa
AA seq
DB search
MAESKISVTQDEFSCSICLETLKDPVTTSCGHSFCMMCINNCWDQADDKGTYSCPQCRKT
FTPRPEVSKNIILANVVENLKKRESQVPPPAGPKDVACDYCTGKKYKAVKSCLVCLASFC
ETHLQPHYQIPSYKKHKLVEASRRLQDQICSQHDKLLEVYCRTDQQCICVLCMLDNHKGH
DTISAAAERTEKQKQLLEIQRKFQEKIQNREKELCELINAVESHKCSAQTAMKNIERICT
ELINSIKRRCSKLKGLIRDRETAEVSRAEKVLKQVEQEIVELKRKDAELEQLSHTEDPVH
FLQNFQSLSAPAGFAESAAITISPSFDDVTKSVSQLREKVEEFWKDQCEKIPDEVKKVLI
TSPPELKIREDFLQLKKVRITSPPEPKIREDFLQYFCQFTLDPNTVNKKLHLSKENKVAT
WSGTLQSYPDHPDRFDCYYQVLCRESVSGRCYWEVEWSGDYGVYIAVSYKSISRKGGGYE
CVFGRNDQSWSLLCSPSRFLFWQKYKKTEIPIMPSSSRIGVYVDYEAGTLSFYSVSDTMK
LLHRVQTTFTQLLYPGFYLDSGSKVKLHEERKRREIRCSSRGLQVATVRLDGFLLTSSPN
CNRQLSLTTKARRSSSRTSLLSSSKSLLLVCRSVNHFF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtcaaaaatttcagtaactcaggacgagttcagctgttcaatctgtctggaa
acactgaaggatccagtgactacatcatgtggacacagtttctgtatgatgtgtattaat
aactgctgggatcaggcggatgataagggaacatacagctgtccacagtgtagaaaaacc
ttcactccaagacctgaagtgagtaaaaacattattctggcaaacgttgtggagaatctg
aaaaagagagaatcccaagttccacctcctgctggacctaaagatgtggcgtgtgattac
tgcactgggaaaaaatacaaagctgttaaatcctgtctggtgtgtttggcctctttctgt
gaaactcaccttcagcctcattatcaaattccttcttataagaagcacaagctggttgaa
gcctccagacgactgcaggatcagatctgctctcagcatgataaactgctggaggtttac
tgtcgtactgatcagcagtgtatctgcgtgttgtgtatgctagacaatcataaaggacat
gatacaatatcagctgcagcagaaagaactgagaaacagaagcagctgctggagatccag
agaaaattccaggagaaaatccagaacagagagaaggaactttgtgagctgataaacgct
gtcgagtctcacaagtgttctgcacagacagcaatgaagaacattgagaggatctgtact
gaactaatcaactcaattaagagaagatgctctaagctaaaaggtctgatcagagatcga
gagacagcagaagtaagtcgtgctgaaaaagtcctgaagcaggtggagcaggagattgta
gagctgaagaggaaagatgctgaactggaacagctttcacacacagaggatcccgtccat
ttcctccagaattttcagtctctctcggctcctgctggatttgcagaatcagccgccatt
acaatcagtccttcatttgatgatgttacaaagtctgtatctcagctgagagagaaagta
gaagaattctggaaagatcagtgtgaaaagataccagatgaagtgaagaaagttctaatt
acttcacctcctgaacttaaaatcagagaagattttctacaattgaagaaagtccggatt
acttcacctcctgaacctaaaatcagagaagattttctacaatatttttgtcagtttaca
ctggatccaaacacagtaaataaaaagctccatctgtctaaggagaacaaagtggcgacc
tggagtggaacattacagtcgtatcctgatcatccagatagatttgattgttactaccag
gttctgtgtagagagagtgtgagtggacgctgttactgggaggttgagtggagtggggat
tatggggtttatatagcagtgtcatataaaagcatcagcaggaagggaggtggttatgag
tgtgtgtttggacggaatgatcagtcctggagtttgttatgttctccatccagattttta
ttctggcaaaagtacaaaaagactgaaattcccataatgccgagttcctctagaatagga
gtgtatgtggattatgaagcaggaactctgtccttctacagcgtctctgatacaatgaag
ctcctccacagagttcagaccacgttcactcagctcctctacccggggttttatcttgat
tcaggatcaaaagtgaaactccacgaagaacgcaaacgccgcgagatccgctgtagctca
cgtgggttgcaggtggcgactgtccgacttgacggctttcttttaacctcctcccccaac
tgcaaccggcagctctcgctgaccaccaaggcgaggcgcagttcatctcgaacaagcctt
ttgtcttcctccaagtccctgctattggtttgcagaagtgtcaatcacttcttctga
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