Trichomycterus rosablanca: 134326407
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Entry
134326407 CDS
T09921
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134326407
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134326407
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
zf-UBP_var
REST_helical
Baculo_PEP_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
134326407
NCBI-ProteinID:
XP_062864631
LinkDB
All DBs
Position
14:27035199..27046944
Genome browser
AA seq
551 aa
AA seq
DB search
MAESKISVTQDEFSCSVCLETLKDPVTILCGHSFCMVCINNCWDQEDNKGTYSCPQCRKT
FTPRPVVSKNIILANVVENLNKKEAQVPLSSGPEDVECDYCTERKSKAVKSCLVCFASFC
ETHLQPHYRIPAYKNHKLVEASRRLQDQICSQHDKLLEVYCRTDQQCICTLCMLDNHKGH
DTISAAAERTEKQKQLLEIQRKFQEKIQNREKELCELINAVESHKCSAQTAVKNIERICT
ELINSINRRCSELKDLIRDRETAEVSRADKVLKQLEEEIVELKRKDAELEQLSHTEDPVH
FLQNFQSLSAPAASAESAAITISPFLSFDDVTKSVSQLKEKVEEFWEDQCEKIPDELKKV
RITSPPEVKIREDFLQYSCQFTLDPNTVNKNLRLSEENKVVTWSKTLQSYPDHPDRFDSF
PQVVCRESVSGRCYWEVGWSGNNGVYITVLYKSISRKGDGDECVFGRNNQSWSLCCSPST
CFFWHNKKETKIPIMPSSSRIGVYVDYEAGTLSFYSISDTMKLLHRVQTTFTQPLYPGFA
VCYGSKVKLSD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtctaaaatttcagtaactcaggacgagttcagctgttcagtctgtctggaa
acactgaaggatccagtaactattctttgtggacacagtttctgtatggtgtgtattaat
aactgctgggatcaggaggataataagggaacatacagctgtccacagtgtagaaaaacc
ttcactccaagacctgttgtgagtaaaaacattattctggcaaatgttgtagagaacctg
aacaagaaagaagcccaagttccactttcttctggacctgaagatgtggagtgtgattac
tgtacagagagaaaatccaaagcagtaaaatcctgtctggtgtgttttgcctctttttgt
gaaactcaccttcagcctcattatcgaattcctgcttataagaatcacaagctggttgaa
gcttccagacgactccaggatcagatctgctctcagcatgataaactgttggaggtttac
tgtcgtactgatcagcagtgtatctgcacgttgtgtatgctagacaatcataaaggacat
gatacaatatcagctgcagcagaaagaactgagaaacagaagcaactgctggagatccag
agaaaattccaggagaaaatccagaacagagagaaggaactttgtgagctgataaacgct
gtggagtctcacaagtgttctgcacagacagcagtgaagaacattgagaggatctgtact
gaactaatcaactcaattaacagaagatgctctgagctaaaagatctgatcagagatcga
gagacagcagaagtaagtcgagctgataaagtcctgaagcagttagaggaggagattgta
gagctgaagagaaaagatgctgaactggaacagctttcacatacagaggatcccgtccat
ttcctgcagaattttcagtctctctcggctcctgctgcatctgcagaatcagccgccatc
acaatcagtcctttcctctcatttgatgatgttacaaagtctgtatctcagctgaaagag
aaagtagaagaattctgggaagatcagtgtgagaagataccagatgaattgaagaaagtc
cggattacttcacctcctgaagttaaaatcagagaagattttctacaatattcttgtcag
ttcacactggatccaaacacagtaaataaaaacctccgtctgtctgaggagaacaaagtg
gtgacctggagtaaaacattacagtcgtatcctgatcatccagatagatttgatagtttc
ccccaggttgtgtgtagagagagtgtgagtggacgctgttactgggaggttgggtggagt
gggaataatggggtttatataacagtgttatataaaagcatcagcaggaagggagatggt
gatgagtgtgtgtttggacgtaataatcagtcctggagtttgtgctgttctccatccacg
tgtttcttctggcacaataagaaagagactaaaattcccataatgccgagttcctctaga
ataggagtgtatgttgattatgaagcaggaactctgtccttctacagcatctctgataca
atgaagctcctccacagagttcagaccacgttcactcagcccctctacccggggtttgca
gtttgttatggatcaaaagtgaaactgtcagattga
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